Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd1Q9D0E3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd1Q9D0E3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd1Q9D0E3 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Lysmd1Q9D0E3 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd1Q9D0E3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd1Q9D0E3 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd1Q9D0E3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd1Q9D0E3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd1Q9D0E3 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd1Q9D0E3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.81■□□□□ 0.28
Lysmd1Q9D0E3 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd1Q9D0E3 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd1Q9D0E3 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd1Q9D0E3 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC16.81■□□□□ 0.28
Lysmd1Q9D0E3 Trav4d-2-201ENSMUST00000120914 335 ntBASIC16.81■□□□□ 0.28
Lysmd1Q9D0E3 Gm44974-201ENSMUST00000206387 1279 ntBASIC16.81■□□□□ 0.28
Lysmd1Q9D0E3 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.81■□□□□ 0.28
Lysmd1Q9D0E3 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.81■□□□□ 0.28
Lysmd1Q9D0E3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd1Q9D0E3 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Lysmd1Q9D0E3 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd1Q9D0E3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd1Q9D0E3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd1Q9D0E3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd1Q9D0E3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd1Q9D0E3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Lysmd1Q9D0E3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd1Q9D0E3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd1Q9D0E3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd1Q9D0E3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd1Q9D0E3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd1Q9D0E3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd1Q9D0E3 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Lysmd1Q9D0E3 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.8■□□□□ 0.28
Lysmd1Q9D0E3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd1Q9D0E3 Gm11661-201ENSMUST00000121761 1327 ntBASIC16.8■□□□□ 0.28
Lysmd1Q9D0E3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd1Q9D0E3 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC16.8■□□□□ 0.28
Lysmd1Q9D0E3 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd1Q9D0E3 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.8■□□□□ 0.28
Lysmd1Q9D0E3 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd1Q9D0E3 Gm43179-201ENSMUST00000198797 275 ntBASIC16.8■□□□□ 0.28
Lysmd1Q9D0E3 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd1Q9D0E3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd1Q9D0E3 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
Lysmd1Q9D0E3 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd1Q9D0E3 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
Lysmd1Q9D0E3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd1Q9D0E3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
Lysmd1Q9D0E3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd1Q9D0E3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd1Q9D0E3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd1Q9D0E3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd1Q9D0E3 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd1Q9D0E3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd1Q9D0E3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd1Q9D0E3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd1Q9D0E3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd1Q9D0E3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd1Q9D0E3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd1Q9D0E3 Gm22189-201ENSMUST00000103822 86 ntBASIC16.79■□□□□ 0.28
Lysmd1Q9D0E3 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC16.79■□□□□ 0.28
Lysmd1Q9D0E3 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.79■□□□□ 0.28
Lysmd1Q9D0E3 Gm17420-201ENSMUST00000164753 153 ntBASIC16.79■□□□□ 0.28
Lysmd1Q9D0E3 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd1Q9D0E3 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd1Q9D0E3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd1Q9D0E3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd1Q9D0E3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd1Q9D0E3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd1Q9D0E3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd1Q9D0E3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd1Q9D0E3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd1Q9D0E3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Lysmd1Q9D0E3 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd1Q9D0E3 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd1Q9D0E3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd1Q9D0E3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd1Q9D0E3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.78■□□□□ 0.28
Lysmd1Q9D0E3 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd1Q9D0E3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Lysmd1Q9D0E3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd1Q9D0E3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd1Q9D0E3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Lysmd1Q9D0E3 Gm8062-201ENSMUST00000139696 444 ntBASIC16.78■□□□□ 0.28
Lysmd1Q9D0E3 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC16.78■□□□□ 0.28
Lysmd1Q9D0E3 CT485787.1-201ENSMUST00000225617 968 ntBASIC16.78■□□□□ 0.28
Lysmd1Q9D0E3 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd1Q9D0E3 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd1Q9D0E3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Lysmd1Q9D0E3 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.78■□□□□ 0.28
Lysmd1Q9D0E3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd1Q9D0E3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd1Q9D0E3 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.78■□□□□ 0.28
Lysmd1Q9D0E3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd1Q9D0E3 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.78■□□□□ 0.28
Lysmd1Q9D0E3 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd1Q9D0E3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd1Q9D0E3 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms