Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Chd1lQ9CXF7 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1lQ9CXF7 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1lQ9CXF7 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1lQ9CXF7 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1lQ9CXF7 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1lQ9CXF7 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1lQ9CXF7 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Chd1lQ9CXF7 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1lQ9CXF7 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1lQ9CXF7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1lQ9CXF7 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chd1lQ9CXF7 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chd1lQ9CXF7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chd1lQ9CXF7 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chd1lQ9CXF7 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chd1lQ9CXF7 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chd1lQ9CXF7 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.92■□□□□ 0.46
Chd1lQ9CXF7 Timm23-208ENSMUST00000226683 750 ntBASIC17.92■□□□□ 0.46
Chd1lQ9CXF7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chd1lQ9CXF7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Chd1lQ9CXF7 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chd1lQ9CXF7 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chd1lQ9CXF7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chd1lQ9CXF7 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chd1lQ9CXF7 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chd1lQ9CXF7 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chd1lQ9CXF7 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chd1lQ9CXF7 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chd1lQ9CXF7 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chd1lQ9CXF7 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chd1lQ9CXF7 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC17.92■□□□□ 0.46
Chd1lQ9CXF7 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chd1lQ9CXF7 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
Chd1lQ9CXF7 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chd1lQ9CXF7 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chd1lQ9CXF7 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chd1lQ9CXF7 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chd1lQ9CXF7 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.91■□□□□ 0.46
Chd1lQ9CXF7 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.91■□□□□ 0.46
Chd1lQ9CXF7 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Chd1lQ9CXF7 Mir1199-201ENSMUST00000117015 119 ntBASIC17.91■□□□□ 0.46
Chd1lQ9CXF7 Gm11539-201ENSMUST00000119837 557 ntBASIC17.91■□□□□ 0.46
Chd1lQ9CXF7 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chd1lQ9CXF7 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chd1lQ9CXF7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.91■□□□□ 0.46
Chd1lQ9CXF7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chd1lQ9CXF7 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chd1lQ9CXF7 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chd1lQ9CXF7 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chd1lQ9CXF7 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chd1lQ9CXF7 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Chd1lQ9CXF7 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chd1lQ9CXF7 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chd1lQ9CXF7 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Chd1lQ9CXF7 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chd1lQ9CXF7 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Chd1lQ9CXF7 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chd1lQ9CXF7 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chd1lQ9CXF7 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chd1lQ9CXF7 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd1lQ9CXF7 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chd1lQ9CXF7 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Chd1lQ9CXF7 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd1lQ9CXF7 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd1lQ9CXF7 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Chd1lQ9CXF7 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd1lQ9CXF7 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Chd1lQ9CXF7 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd1lQ9CXF7 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd1lQ9CXF7 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.9■□□□□ 0.46
Chd1lQ9CXF7 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd1lQ9CXF7 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chd1lQ9CXF7 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd1lQ9CXF7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd1lQ9CXF7 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chd1lQ9CXF7 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chd1lQ9CXF7 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd1lQ9CXF7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd1lQ9CXF7 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Chd1lQ9CXF7 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chd1lQ9CXF7 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chd1lQ9CXF7 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd1lQ9CXF7 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd1lQ9CXF7 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd1lQ9CXF7 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd1lQ9CXF7 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd1lQ9CXF7 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.89■□□□□ 0.46
Chd1lQ9CXF7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chd1lQ9CXF7 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chd1lQ9CXF7 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Chd1lQ9CXF7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Chd1lQ9CXF7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Chd1lQ9CXF7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.89■□□□□ 0.45
Chd1lQ9CXF7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.89■□□□□ 0.45
Chd1lQ9CXF7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.89■□□□□ 0.45
Chd1lQ9CXF7 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Chd1lQ9CXF7 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chd1lQ9CXF7 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chd1lQ9CXF7 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms