Protein–RNA interactions for Protein: Q91VH2

Snx9, Sorting nexin-9, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx9Q91VH2 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.61■□□□□ 0.25
Snx9Q91VH2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snx9Q91VH2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.61■□□□□ 0.25
Snx9Q91VH2 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.61■□□□□ 0.25
Snx9Q91VH2 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snx9Q91VH2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Snx9Q91VH2 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snx9Q91VH2 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snx9Q91VH2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Snx9Q91VH2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snx9Q91VH2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snx9Q91VH2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.61■□□□□ 0.25
Snx9Q91VH2 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Snx9Q91VH2 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Snx9Q91VH2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snx9Q91VH2 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snx9Q91VH2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.6■□□□□ 0.25
Snx9Q91VH2 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snx9Q91VH2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Snx9Q91VH2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.6■□□□□ 0.25
Snx9Q91VH2 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.6■□□□□ 0.25
Snx9Q91VH2 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Snx9Q91VH2 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.6■□□□□ 0.25
Snx9Q91VH2 Gm18622-201ENSMUST00000219361 595 ntBASIC16.6■□□□□ 0.25
Snx9Q91VH2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.6■□□□□ 0.25
Snx9Q91VH2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snx9Q91VH2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snx9Q91VH2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snx9Q91VH2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Snx9Q91VH2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snx9Q91VH2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Snx9Q91VH2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Snx9Q91VH2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snx9Q91VH2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Snx9Q91VH2 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snx9Q91VH2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Snx9Q91VH2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snx9Q91VH2 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snx9Q91VH2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snx9Q91VH2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snx9Q91VH2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snx9Q91VH2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snx9Q91VH2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snx9Q91VH2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Snx9Q91VH2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snx9Q91VH2 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snx9Q91VH2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Snx9Q91VH2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Snx9Q91VH2 Gm6257-201ENSMUST00000163864 910 ntBASIC16.59■□□□□ 0.25
Snx9Q91VH2 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Snx9Q91VH2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
Snx9Q91VH2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Snx9Q91VH2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.59■□□□□ 0.25
Snx9Q91VH2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.59■□□□□ 0.25
Snx9Q91VH2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Snx9Q91VH2 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Snx9Q91VH2 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snx9Q91VH2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Snx9Q91VH2 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snx9Q91VH2 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Snx9Q91VH2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Snx9Q91VH2 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snx9Q91VH2 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.59■□□□□ 0.25
Snx9Q91VH2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Snx9Q91VH2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snx9Q91VH2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Snx9Q91VH2 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snx9Q91VH2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snx9Q91VH2 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Snx9Q91VH2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.59■□□□□ 0.25
Snx9Q91VH2 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Snx9Q91VH2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Snx9Q91VH2 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Snx9Q91VH2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Snx9Q91VH2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Snx9Q91VH2 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Snx9Q91VH2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Snx9Q91VH2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Snx9Q91VH2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.58■□□□□ 0.24
Snx9Q91VH2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Snx9Q91VH2 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Snx9Q91VH2 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Snx9Q91VH2 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Snx9Q91VH2 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Snx9Q91VH2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Snx9Q91VH2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Snx9Q91VH2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Snx9Q91VH2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Snx9Q91VH2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Snx9Q91VH2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.58■□□□□ 0.24
Snx9Q91VH2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Snx9Q91VH2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Snx9Q91VH2 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Snx9Q91VH2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.57■□□□□ 0.24
Snx9Q91VH2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Snx9Q91VH2 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snx9Q91VH2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snx9Q91VH2 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snx9Q91VH2 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Snx9Q91VH2 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms