Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.93■□□□□ 0.62
Top1mtQ8R4U6 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Top1mtQ8R4U6 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Top1mtQ8R4U6 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.92■□□□□ 0.62
Top1mtQ8R4U6 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Top1mtQ8R4U6 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Top1mtQ8R4U6 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Top1mtQ8R4U6 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Top1mtQ8R4U6 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Top1mtQ8R4U6 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Top1mtQ8R4U6 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Top1mtQ8R4U6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Top1mtQ8R4U6 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Top1mtQ8R4U6 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Top1mtQ8R4U6 Gm15165-201ENSMUST00000118140 502 ntBASIC18.92■□□□□ 0.62
Top1mtQ8R4U6 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Top1mtQ8R4U6 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Top1mtQ8R4U6 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.92■□□□□ 0.62
Top1mtQ8R4U6 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Top1mtQ8R4U6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Top1mtQ8R4U6 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Top1mtQ8R4U6 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.92■□□□□ 0.62
Top1mtQ8R4U6 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Top1mtQ8R4U6 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Top1mtQ8R4U6 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Top1mtQ8R4U6 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Top1mtQ8R4U6 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Top1mtQ8R4U6 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Top1mtQ8R4U6 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Top1mtQ8R4U6 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Top1mtQ8R4U6 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Top1mtQ8R4U6 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Top1mtQ8R4U6 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Top1mtQ8R4U6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Top1mtQ8R4U6 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Top1mtQ8R4U6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Top1mtQ8R4U6 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Top1mtQ8R4U6 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Top1mtQ8R4U6 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Top1mtQ8R4U6 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Top1mtQ8R4U6 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Top1mtQ8R4U6 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Top1mtQ8R4U6 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Top1mtQ8R4U6 Gm27867-201ENSMUST00000184778 125 ntBASIC18.91■□□□□ 0.62
Top1mtQ8R4U6 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Top1mtQ8R4U6 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Top1mtQ8R4U6 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Top1mtQ8R4U6 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Top1mtQ8R4U6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Top1mtQ8R4U6 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Top1mtQ8R4U6 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Top1mtQ8R4U6 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Top1mtQ8R4U6 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Top1mtQ8R4U6 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Top1mtQ8R4U6 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Top1mtQ8R4U6 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Top1mtQ8R4U6 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Top1mtQ8R4U6 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Top1mtQ8R4U6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.9■□□□□ 0.62
Top1mtQ8R4U6 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
Top1mtQ8R4U6 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.9■□□□□ 0.62
Top1mtQ8R4U6 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.9■□□□□ 0.62
Top1mtQ8R4U6 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Top1mtQ8R4U6 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Top1mtQ8R4U6 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Top1mtQ8R4U6 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Top1mtQ8R4U6 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Top1mtQ8R4U6 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Top1mtQ8R4U6 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Top1mtQ8R4U6 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Top1mtQ8R4U6 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
Top1mtQ8R4U6 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Top1mtQ8R4U6 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Top1mtQ8R4U6 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Top1mtQ8R4U6 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Top1mtQ8R4U6 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Top1mtQ8R4U6 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Top1mtQ8R4U6 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.89■□□□□ 0.61
Top1mtQ8R4U6 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Top1mtQ8R4U6 Gm17807-201ENSMUST00000186869 298 ntBASIC18.89■□□□□ 0.61
Top1mtQ8R4U6 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.89■□□□□ 0.61
Top1mtQ8R4U6 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Top1mtQ8R4U6 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Top1mtQ8R4U6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Top1mtQ8R4U6 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Top1mtQ8R4U6 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Top1mtQ8R4U6 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.89■□□□□ 0.61
Top1mtQ8R4U6 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Top1mtQ8R4U6 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Top1mtQ8R4U6 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Top1mtQ8R4U6 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Top1mtQ8R4U6 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Top1mtQ8R4U6 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.88■□□□□ 0.61
Top1mtQ8R4U6 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Top1mtQ8R4U6 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Top1mtQ8R4U6 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Top1mtQ8R4U6 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Top1mtQ8R4U6 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Top1mtQ8R4U6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Top1mtQ8R4U6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms