Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc58Q8R3Q6 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc58Q8R3Q6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc58Q8R3Q6 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc58Q8R3Q6 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc58Q8R3Q6 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc58Q8R3Q6 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc58Q8R3Q6 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc58Q8R3Q6 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc58Q8R3Q6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc58Q8R3Q6 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Ccdc58Q8R3Q6 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc58Q8R3Q6 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc58Q8R3Q6 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc58Q8R3Q6 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.21□□□□□ -0.13
Ccdc58Q8R3Q6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.21□□□□□ -0.13
Ccdc58Q8R3Q6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc58Q8R3Q6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.21□□□□□ -0.13
Ccdc58Q8R3Q6 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Ccdc58Q8R3Q6 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.21□□□□□ -0.13
Ccdc58Q8R3Q6 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc58Q8R3Q6 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ccdc58Q8R3Q6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc58Q8R3Q6 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc58Q8R3Q6 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc58Q8R3Q6 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc58Q8R3Q6 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.21□□□□□ -0.14
Ccdc58Q8R3Q6 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc58Q8R3Q6 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc58Q8R3Q6 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc58Q8R3Q6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc58Q8R3Q6 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc58Q8R3Q6 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc58Q8R3Q6 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Ccdc58Q8R3Q6 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ccdc58Q8R3Q6 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc58Q8R3Q6 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc58Q8R3Q6 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc58Q8R3Q6 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc58Q8R3Q6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.2□□□□□ -0.14
Ccdc58Q8R3Q6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc58Q8R3Q6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.2□□□□□ -0.14
Ccdc58Q8R3Q6 Odf3b-204ENSMUST00000227834 930 ntBASIC14.2□□□□□ -0.14
Ccdc58Q8R3Q6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc58Q8R3Q6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc58Q8R3Q6 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc58Q8R3Q6 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc58Q8R3Q6 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc58Q8R3Q6 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc58Q8R3Q6 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc58Q8R3Q6 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc58Q8R3Q6 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc58Q8R3Q6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc58Q8R3Q6 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc58Q8R3Q6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc58Q8R3Q6 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc58Q8R3Q6 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc58Q8R3Q6 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc58Q8R3Q6 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc58Q8R3Q6 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc58Q8R3Q6 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc58Q8R3Q6 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc58Q8R3Q6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc58Q8R3Q6 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc58Q8R3Q6 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc58Q8R3Q6 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc58Q8R3Q6 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc58Q8R3Q6 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms