Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ddx54Q8K4L0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx54Q8K4L0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx54Q8K4L0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx54Q8K4L0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx54Q8K4L0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx54Q8K4L0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.63■□□□□ 0.89
Ddx54Q8K4L0 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC20.63■□□□□ 0.89
Ddx54Q8K4L0 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx54Q8K4L0 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ddx54Q8K4L0 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx54Q8K4L0 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC20.63■□□□□ 0.89
Ddx54Q8K4L0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx54Q8K4L0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx54Q8K4L0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx54Q8K4L0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.63■□□□□ 0.89
Ddx54Q8K4L0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.63■□□□□ 0.89
Ddx54Q8K4L0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Ddx54Q8K4L0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx54Q8K4L0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.62■□□□□ 0.89
Ddx54Q8K4L0 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx54Q8K4L0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx54Q8K4L0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ddx54Q8K4L0 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Ddx54Q8K4L0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx54Q8K4L0 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx54Q8K4L0 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ddx54Q8K4L0 Gm6415-201ENSMUST00000118488 348 ntBASIC20.62■□□□□ 0.89
Ddx54Q8K4L0 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx54Q8K4L0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx54Q8K4L0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx54Q8K4L0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx54Q8K4L0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx54Q8K4L0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ddx54Q8K4L0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ddx54Q8K4L0 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ddx54Q8K4L0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx54Q8K4L0 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx54Q8K4L0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx54Q8K4L0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx54Q8K4L0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx54Q8K4L0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx54Q8K4L0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ddx54Q8K4L0 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ddx54Q8K4L0 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx54Q8K4L0 Gm18187-201ENSMUST00000196476 984 ntBASIC20.61■□□□□ 0.89
Ddx54Q8K4L0 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ddx54Q8K4L0 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC20.61■□□□□ 0.89
Ddx54Q8K4L0 Gm7730-201ENSMUST00000212486 454 ntBASIC20.61■□□□□ 0.89
Ddx54Q8K4L0 AC135669.1-201ENSMUST00000213585 412 ntBASIC20.61■□□□□ 0.89
Ddx54Q8K4L0 Cdk7-205ENSMUST00000225990 1159 ntBASIC20.61■□□□□ 0.89
Ddx54Q8K4L0 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx54Q8K4L0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ddx54Q8K4L0 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.61■□□□□ 0.89
Ddx54Q8K4L0 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx54Q8K4L0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx54Q8K4L0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ddx54Q8K4L0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx54Q8K4L0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx54Q8K4L0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx54Q8K4L0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx54Q8K4L0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx54Q8K4L0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx54Q8K4L0 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC20.6■□□□□ 0.89
Ddx54Q8K4L0 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx54Q8K4L0 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx54Q8K4L0 Gm15693-201ENSMUST00000120470 637 ntBASIC20.6■□□□□ 0.89
Ddx54Q8K4L0 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Ddx54Q8K4L0 Mir7684-201ENSMUST00000183858 60 ntBASIC20.6■□□□□ 0.89
Ddx54Q8K4L0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC20.6■□□□□ 0.89
Ddx54Q8K4L0 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx54Q8K4L0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx54Q8K4L0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC20.6■□□□□ 0.89
Ddx54Q8K4L0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx54Q8K4L0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx54Q8K4L0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx54Q8K4L0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx54Q8K4L0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx54Q8K4L0 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC20.59■□□□□ 0.89
Ddx54Q8K4L0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx54Q8K4L0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC20.59■□□□□ 0.89
Ddx54Q8K4L0 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC20.59■□□□□ 0.89
Ddx54Q8K4L0 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx54Q8K4L0 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC20.59■□□□□ 0.89
Ddx54Q8K4L0 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx54Q8K4L0 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ddx54Q8K4L0 AC158538.2-201ENSMUST00000225455 906 ntBASIC20.59■□□□□ 0.89
Ddx54Q8K4L0 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx54Q8K4L0 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx54Q8K4L0 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx54Q8K4L0 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx54Q8K4L0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx54Q8K4L0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx54Q8K4L0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx54Q8K4L0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx54Q8K4L0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx54Q8K4L0 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx54Q8K4L0 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.58■□□□□ 0.89
Ddx54Q8K4L0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx54Q8K4L0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms