Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim52Q8CDV4 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim52Q8CDV4 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC19.45■□□□□ 0.7
Trim52Q8CDV4 Gm14722-201ENSMUST00000118943 689 ntBASIC19.45■□□□□ 0.7
Trim52Q8CDV4 Mir7036b-201ENSMUST00000184791 63 ntBASIC19.45■□□□□ 0.7
Trim52Q8CDV4 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim52Q8CDV4 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC19.45■□□□□ 0.7
Trim52Q8CDV4 Gm18246-201ENSMUST00000221023 728 ntBASIC19.45■□□□□ 0.7
Trim52Q8CDV4 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim52Q8CDV4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim52Q8CDV4 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim52Q8CDV4 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim52Q8CDV4 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Trim52Q8CDV4 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim52Q8CDV4 Gm5184-201ENSMUST00000220417 1702 ntBASIC19.45■□□□□ 0.7
Trim52Q8CDV4 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Trim52Q8CDV4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim52Q8CDV4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trim52Q8CDV4 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trim52Q8CDV4 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim52Q8CDV4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trim52Q8CDV4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim52Q8CDV4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim52Q8CDV4 Gm12892-201ENSMUST00000117367 1146 ntBASIC19.44■□□□□ 0.7
Trim52Q8CDV4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim52Q8CDV4 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC19.44■□□□□ 0.7
Trim52Q8CDV4 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Trim52Q8CDV4 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim52Q8CDV4 AC160980.1-201ENSMUST00000224136 970 ntBASIC19.44■□□□□ 0.7
Trim52Q8CDV4 AC124549.3-201ENSMUST00000225541 367 ntBASIC19.44■□□□□ 0.7
Trim52Q8CDV4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Trim52Q8CDV4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim52Q8CDV4 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim52Q8CDV4 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim52Q8CDV4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim52Q8CDV4 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim52Q8CDV4 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim52Q8CDV4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim52Q8CDV4 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Trim52Q8CDV4 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.43■□□□□ 0.7
Trim52Q8CDV4 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trim52Q8CDV4 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim52Q8CDV4 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim52Q8CDV4 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim52Q8CDV4 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC19.43■□□□□ 0.7
Trim52Q8CDV4 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim52Q8CDV4 Gm11453-201ENSMUST00000117318 1007 ntBASIC19.43■□□□□ 0.7
Trim52Q8CDV4 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC19.43■□□□□ 0.7
Trim52Q8CDV4 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim52Q8CDV4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Trim52Q8CDV4 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim52Q8CDV4 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Trim52Q8CDV4 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC19.42■□□□□ 0.7
Trim52Q8CDV4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trim52Q8CDV4 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim52Q8CDV4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim52Q8CDV4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim52Q8CDV4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim52Q8CDV4 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim52Q8CDV4 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim52Q8CDV4 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim52Q8CDV4 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim52Q8CDV4 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim52Q8CDV4 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim52Q8CDV4 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim52Q8CDV4 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim52Q8CDV4 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trim52Q8CDV4 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim52Q8CDV4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.42■□□□□ 0.7
Trim52Q8CDV4 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.42■□□□□ 0.7
Trim52Q8CDV4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Trim52Q8CDV4 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim52Q8CDV4 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim52Q8CDV4 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Trim52Q8CDV4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim52Q8CDV4 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim52Q8CDV4 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim52Q8CDV4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim52Q8CDV4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.41■□□□□ 0.7
Trim52Q8CDV4 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim52Q8CDV4 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Trim52Q8CDV4 Gm15427-201ENSMUST00000117288 531 ntBASIC19.41■□□□□ 0.7
Trim52Q8CDV4 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC19.41■□□□□ 0.7
Trim52Q8CDV4 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC19.41■□□□□ 0.7
Trim52Q8CDV4 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim52Q8CDV4 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Trim52Q8CDV4 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim52Q8CDV4 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim52Q8CDV4 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim52Q8CDV4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim52Q8CDV4 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim52Q8CDV4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim52Q8CDV4 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim52Q8CDV4 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim52Q8CDV4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim52Q8CDV4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim52Q8CDV4 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim52Q8CDV4 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim52Q8CDV4 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim52Q8CDV4 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms