Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf38Q8BI21 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 Gm13836-201ENSMUST00000121159 501 ntBASIC15.29■□□□□ 0.04
Rnf38Q8BI21 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Rnf38Q8BI21 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf38Q8BI21 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf38Q8BI21 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf38Q8BI21 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf38Q8BI21 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf38Q8BI21 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf38Q8BI21 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rnf38Q8BI21 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf38Q8BI21 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf38Q8BI21 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf38Q8BI21 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf38Q8BI21 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.28■□□□□ 0.04
Rnf38Q8BI21 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rnf38Q8BI21 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf38Q8BI21 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rnf38Q8BI21 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.28■□□□□ 0.04
Rnf38Q8BI21 Gm18032-201ENSMUST00000222541 538 ntBASIC15.28■□□□□ 0.04
Rnf38Q8BI21 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf38Q8BI21 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf38Q8BI21 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf38Q8BI21 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf38Q8BI21 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf38Q8BI21 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf38Q8BI21 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Rnf38Q8BI21 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rnf38Q8BI21 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf38Q8BI21 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf38Q8BI21 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf38Q8BI21 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf38Q8BI21 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf38Q8BI21 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rnf38Q8BI21 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms