Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim23Q8BGX0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim23Q8BGX0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim23Q8BGX0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim23Q8BGX0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim23Q8BGX0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim23Q8BGX0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.26■□□□□ 0.03
Trim23Q8BGX0 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trim23Q8BGX0 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.26■□□□□ 0.03
Trim23Q8BGX0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trim23Q8BGX0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim23Q8BGX0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trim23Q8BGX0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim23Q8BGX0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim23Q8BGX0 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim23Q8BGX0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Trim23Q8BGX0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim23Q8BGX0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim23Q8BGX0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Trim23Q8BGX0 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim23Q8BGX0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim23Q8BGX0 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim23Q8BGX0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim23Q8BGX0 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.25■□□□□ 0.03
Trim23Q8BGX0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim23Q8BGX0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim23Q8BGX0 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim23Q8BGX0 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim23Q8BGX0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim23Q8BGX0 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim23Q8BGX0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.25■□□□□ 0.03
Trim23Q8BGX0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim23Q8BGX0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim23Q8BGX0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trim23Q8BGX0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim23Q8BGX0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim23Q8BGX0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim23Q8BGX0 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim23Q8BGX0 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim23Q8BGX0 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim23Q8BGX0 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim23Q8BGX0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim23Q8BGX0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim23Q8BGX0 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim23Q8BGX0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim23Q8BGX0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim23Q8BGX0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim23Q8BGX0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim23Q8BGX0 Gm11452-201ENSMUST00000122376 690 ntBASIC15.24■□□□□ 0.03
Trim23Q8BGX0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.24■□□□□ 0.03
Trim23Q8BGX0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim23Q8BGX0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trim23Q8BGX0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.24■□□□□ 0.03
Trim23Q8BGX0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.24■□□□□ 0.03
Trim23Q8BGX0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim23Q8BGX0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim23Q8BGX0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trim23Q8BGX0 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.24■□□□□ 0.03
Trim23Q8BGX0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim23Q8BGX0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim23Q8BGX0 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim23Q8BGX0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim23Q8BGX0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim23Q8BGX0 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim23Q8BGX0 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim23Q8BGX0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim23Q8BGX0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim23Q8BGX0 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.24■□□□□ 0.03
Trim23Q8BGX0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trim23Q8BGX0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim23Q8BGX0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim23Q8BGX0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim23Q8BGX0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim23Q8BGX0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim23Q8BGX0 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim23Q8BGX0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim23Q8BGX0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim23Q8BGX0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.23■□□□□ 0.03
Trim23Q8BGX0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
Trim23Q8BGX0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trim23Q8BGX0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim23Q8BGX0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.23■□□□□ 0.03
Trim23Q8BGX0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.23■□□□□ 0.03
Trim23Q8BGX0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim23Q8BGX0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim23Q8BGX0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim23Q8BGX0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim23Q8BGX0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim23Q8BGX0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trim23Q8BGX0 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim23Q8BGX0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trim23Q8BGX0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim23Q8BGX0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim23Q8BGX0 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
Trim23Q8BGX0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim23Q8BGX0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim23Q8BGX0 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim23Q8BGX0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim23Q8BGX0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim23Q8BGX0 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms