Protein–RNA interactions for Protein: Q8BFX1

Rnf187, E3 ubiquitin-protein ligase RNF187, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf187Q8BFX1 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf187Q8BFX1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf187Q8BFX1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.07■□□□□ 0.32
Rnf187Q8BFX1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf187Q8BFX1 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rnf187Q8BFX1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf187Q8BFX1 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf187Q8BFX1 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rnf187Q8BFX1 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rnf187Q8BFX1 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf187Q8BFX1 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf187Q8BFX1 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf187Q8BFX1 Phf7-203ENSMUST00000226565 1971 ntBASIC17.07■□□□□ 0.32
Rnf187Q8BFX1 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf187Q8BFX1 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.07■□□□□ 0.32
Rnf187Q8BFX1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Rnf187Q8BFX1 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf187Q8BFX1 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf187Q8BFX1 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf187Q8BFX1 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.07■□□□□ 0.32
Rnf187Q8BFX1 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf187Q8BFX1 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf187Q8BFX1 Gm38042-201ENSMUST00000191614 5208 ntBASIC17.06■□□□□ 0.32
Rnf187Q8BFX1 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf187Q8BFX1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf187Q8BFX1 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rnf187Q8BFX1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf187Q8BFX1 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rnf187Q8BFX1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf187Q8BFX1 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.06■□□□□ 0.32
Rnf187Q8BFX1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf187Q8BFX1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf187Q8BFX1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf187Q8BFX1 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf187Q8BFX1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf187Q8BFX1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Rnf187Q8BFX1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf187Q8BFX1 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf187Q8BFX1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf187Q8BFX1 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rnf187Q8BFX1 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf187Q8BFX1 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Rnf187Q8BFX1 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf187Q8BFX1 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rnf187Q8BFX1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf187Q8BFX1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rnf187Q8BFX1 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf187Q8BFX1 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf187Q8BFX1 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf187Q8BFX1 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf187Q8BFX1 Gm22697-201ENSMUST00000175194 63 ntBASIC17.05■□□□□ 0.32
Rnf187Q8BFX1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.05■□□□□ 0.32
Rnf187Q8BFX1 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rnf187Q8BFX1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf187Q8BFX1 Gm9987-201ENSMUST00000069768 567 ntBASIC17.05■□□□□ 0.32
Rnf187Q8BFX1 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf187Q8BFX1 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf187Q8BFX1 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.05■□□□□ 0.32
Rnf187Q8BFX1 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf187Q8BFX1 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.05■□□□□ 0.32
Rnf187Q8BFX1 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf187Q8BFX1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf187Q8BFX1 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf187Q8BFX1 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 Gm10566-201ENSMUST00000086739 996 ntBASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf187Q8BFX1 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf187Q8BFX1 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf187Q8BFX1 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf187Q8BFX1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf187Q8BFX1 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms