Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Haglr-201ENSMUST00000100000 2085 ntBASIC15.51■□□□□ 0.07
Pcdh19Q80TF3 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh19Q80TF3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh19Q80TF3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh19Q80TF3 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh19Q80TF3 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh19Q80TF3 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdh19Q80TF3 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Pcdh19Q80TF3 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh19Q80TF3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh19Q80TF3 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh19Q80TF3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh19Q80TF3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdh19Q80TF3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdh19Q80TF3 Gm8344-201ENSMUST00000119813 856 ntBASIC15.5■□□□□ 0.07
Pcdh19Q80TF3 Gm1401-201ENSMUST00000122048 772 ntBASIC15.5■□□□□ 0.07
Pcdh19Q80TF3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.5■□□□□ 0.07
Pcdh19Q80TF3 Gm6257-201ENSMUST00000163864 910 ntBASIC15.5■□□□□ 0.07
Pcdh19Q80TF3 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdh19Q80TF3 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh19Q80TF3 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.5■□□□□ 0.07
Pcdh19Q80TF3 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh19Q80TF3 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh19Q80TF3 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdh19Q80TF3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh19Q80TF3 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.5■□□□□ 0.07
Pcdh19Q80TF3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh19Q80TF3 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh19Q80TF3 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Pcdh19Q80TF3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh19Q80TF3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdh19Q80TF3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh19Q80TF3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh19Q80TF3 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh19Q80TF3 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdh19Q80TF3 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Pcdh19Q80TF3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.49■□□□□ 0.07
Pcdh19Q80TF3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh19Q80TF3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh19Q80TF3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh19Q80TF3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh19Q80TF3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdh19Q80TF3 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.49■□□□□ 0.07
Pcdh19Q80TF3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.49■□□□□ 0.07
Pcdh19Q80TF3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.49■□□□□ 0.07
Pcdh19Q80TF3 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh19Q80TF3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Pcdh19Q80TF3 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdh19Q80TF3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh19Q80TF3 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh19Q80TF3 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdh19Q80TF3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh19Q80TF3 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Pcdh19Q80TF3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh19Q80TF3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh19Q80TF3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh19Q80TF3 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh19Q80TF3 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh19Q80TF3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh19Q80TF3 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh19Q80TF3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh19Q80TF3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh19Q80TF3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
Pcdh19Q80TF3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh19Q80TF3 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh19Q80TF3 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.48■□□□□ 0.07
Pcdh19Q80TF3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.48■□□□□ 0.07
Pcdh19Q80TF3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh19Q80TF3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh19Q80TF3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh19Q80TF3 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Pcdh19Q80TF3 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.48■□□□□ 0.07
Pcdh19Q80TF3 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.48■□□□□ 0.07
Pcdh19Q80TF3 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.48■□□□□ 0.07
Pcdh19Q80TF3 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh19Q80TF3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Pcdh19Q80TF3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh19Q80TF3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh19Q80TF3 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh19Q80TF3 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh19Q80TF3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh19Q80TF3 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh19Q80TF3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh19Q80TF3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh19Q80TF3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Pcdh19Q80TF3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh19Q80TF3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh19Q80TF3 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh19Q80TF3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh19Q80TF3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdh19Q80TF3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh19Q80TF3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Pcdh19Q80TF3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh19Q80TF3 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.47■□□□□ 0.07
Pcdh19Q80TF3 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh19Q80TF3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.47■□□□□ 0.07
Pcdh19Q80TF3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh19Q80TF3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh19Q80TF3 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh19Q80TF3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms