Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.06□□□□□ -0.48
Zfp248Q640N4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp248Q640N4 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.06□□□□□ -0.48
Zfp248Q640N4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Zfp248Q640N4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Zfp248Q640N4 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.05□□□□□ -0.48
Zfp248Q640N4 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Zfp248Q640N4 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Zfp248Q640N4 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Zfp248Q640N4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Zfp248Q640N4 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Zfp248Q640N4 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Zfp248Q640N4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Zfp248Q640N4 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Zfp248Q640N4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Zfp248Q640N4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.05□□□□□ -0.48
Zfp248Q640N4 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Zfp248Q640N4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Zfp248Q640N4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.05□□□□□ -0.48
Zfp248Q640N4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.05□□□□□ -0.48
Zfp248Q640N4 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.05□□□□□ -0.48
Zfp248Q640N4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Zfp248Q640N4 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.05□□□□□ -0.48
Zfp248Q640N4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Zfp248Q640N4 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Zfp248Q640N4 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Zfp248Q640N4 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Zfp248Q640N4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Zfp248Q640N4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Zfp248Q640N4 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Zfp248Q640N4 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Zfp248Q640N4 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Zfp248Q640N4 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Zfp248Q640N4 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Zfp248Q640N4 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Zfp248Q640N4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Mir770-201ENSMUST00000103252 94 ntBASIC12.04□□□□□ -0.48
Zfp248Q640N4 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Gm9013-201ENSMUST00000132939 882 ntBASIC12.04□□□□□ -0.48
Zfp248Q640N4 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zfp248Q640N4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Zfp248Q640N4 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms