Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Scnn1aQ61180 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scnn1aQ61180 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Scnn1aQ61180 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Scnn1aQ61180 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scnn1aQ61180 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scnn1aQ61180 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scnn1aQ61180 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Scnn1aQ61180 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Scnn1aQ61180 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scnn1aQ61180 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scnn1aQ61180 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.14■□□□□ 0.49
Scnn1aQ61180 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scnn1aQ61180 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scnn1aQ61180 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scnn1aQ61180 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scnn1aQ61180 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scnn1aQ61180 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scnn1aQ61180 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Scnn1aQ61180 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scnn1aQ61180 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.14■□□□□ 0.49
Scnn1aQ61180 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scnn1aQ61180 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.14■□□□□ 0.49
Scnn1aQ61180 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scnn1aQ61180 Mir3113-201ENSMUST00000175478 76 ntBASIC18.14■□□□□ 0.49
Scnn1aQ61180 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scnn1aQ61180 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scnn1aQ61180 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scnn1aQ61180 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scnn1aQ61180 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scnn1aQ61180 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
Scnn1aQ61180 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scnn1aQ61180 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scnn1aQ61180 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scnn1aQ61180 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scnn1aQ61180 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scnn1aQ61180 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scnn1aQ61180 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scnn1aQ61180 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scnn1aQ61180 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scnn1aQ61180 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scnn1aQ61180 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.13■□□□□ 0.49
Scnn1aQ61180 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Scnn1aQ61180 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scnn1aQ61180 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.13■□□□□ 0.49
Scnn1aQ61180 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scnn1aQ61180 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scnn1aQ61180 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
Scnn1aQ61180 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.13■□□□□ 0.49
Scnn1aQ61180 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scnn1aQ61180 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scnn1aQ61180 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Scnn1aQ61180 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scnn1aQ61180 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.13■□□□□ 0.49
Scnn1aQ61180 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Scnn1aQ61180 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scnn1aQ61180 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scnn1aQ61180 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scnn1aQ61180 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scnn1aQ61180 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scnn1aQ61180 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scnn1aQ61180 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scnn1aQ61180 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Scnn1aQ61180 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Scnn1aQ61180 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.12■□□□□ 0.49
Scnn1aQ61180 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Scnn1aQ61180 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.12■□□□□ 0.49
Scnn1aQ61180 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scnn1aQ61180 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Scnn1aQ61180 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scnn1aQ61180 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scnn1aQ61180 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scnn1aQ61180 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scnn1aQ61180 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scnn1aQ61180 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scnn1aQ61180 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scnn1aQ61180 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.12■□□□□ 0.49
Scnn1aQ61180 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.12■□□□□ 0.49
Scnn1aQ61180 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scnn1aQ61180 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.12■□□□□ 0.49
Scnn1aQ61180 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Scnn1aQ61180 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.12■□□□□ 0.49
Scnn1aQ61180 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scnn1aQ61180 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scnn1aQ61180 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scnn1aQ61180 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Scnn1aQ61180 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.12■□□□□ 0.49
Scnn1aQ61180 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.12■□□□□ 0.49
Scnn1aQ61180 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scnn1aQ61180 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scnn1aQ61180 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scnn1aQ61180 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scnn1aQ61180 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scnn1aQ61180 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.11■□□□□ 0.49
Scnn1aQ61180 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scnn1aQ61180 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.11■□□□□ 0.49
Scnn1aQ61180 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scnn1aQ61180 Gm27702-201ENSMUST00000184512 56 ntBASIC18.11■□□□□ 0.49
Scnn1aQ61180 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scnn1aQ61180 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms