Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brf2Q3UAW9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brf2Q3UAW9 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brf2Q3UAW9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brf2Q3UAW9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brf2Q3UAW9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brf2Q3UAW9 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brf2Q3UAW9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brf2Q3UAW9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Brf2Q3UAW9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.92□□□□□ -0.02
Brf2Q3UAW9 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.92□□□□□ -0.02
Brf2Q3UAW9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Brf2Q3UAW9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brf2Q3UAW9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.92□□□□□ -0.02
Brf2Q3UAW9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.92□□□□□ -0.02
Brf2Q3UAW9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Brf2Q3UAW9 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brf2Q3UAW9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.92□□□□□ -0.02
Brf2Q3UAW9 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brf2Q3UAW9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Brf2Q3UAW9 Prob1-201ENSMUST00000097619 3021 ntBASIC14.92□□□□□ -0.02
Brf2Q3UAW9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brf2Q3UAW9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brf2Q3UAW9 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.92□□□□□ -0.02
Brf2Q3UAW9 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.91□□□□□ -0.02
Brf2Q3UAW9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Brf2Q3UAW9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Brf2Q3UAW9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Brf2Q3UAW9 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Brf2Q3UAW9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Brf2Q3UAW9 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Brf2Q3UAW9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Brf2Q3UAW9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.91□□□□□ -0.02
Brf2Q3UAW9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Brf2Q3UAW9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Brf2Q3UAW9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Brf2Q3UAW9 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Brf2Q3UAW9 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Brf2Q3UAW9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Brf2Q3UAW9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Brf2Q3UAW9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.91□□□□□ -0.02
Brf2Q3UAW9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Brf2Q3UAW9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Brf2Q3UAW9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brf2Q3UAW9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brf2Q3UAW9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brf2Q3UAW9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Brf2Q3UAW9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brf2Q3UAW9 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brf2Q3UAW9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.9□□□□□ -0.02
Brf2Q3UAW9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brf2Q3UAW9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brf2Q3UAW9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Brf2Q3UAW9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brf2Q3UAW9 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brf2Q3UAW9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Brf2Q3UAW9 Gm15794-201ENSMUST00000120182 631 ntBASIC14.9□□□□□ -0.02
Brf2Q3UAW9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brf2Q3UAW9 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.9□□□□□ -0.02
Brf2Q3UAW9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.9□□□□□ -0.02
Brf2Q3UAW9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brf2Q3UAW9 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brf2Q3UAW9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brf2Q3UAW9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Brf2Q3UAW9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brf2Q3UAW9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brf2Q3UAW9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Gm13312-201ENSMUST00000119631 718 ntBASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Gm6257-201ENSMUST00000163864 910 ntBASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brf2Q3UAW9 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brf2Q3UAW9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brf2Q3UAW9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms