Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Gm7889-201ENSMUST00000185591 958 ntBASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trim43aQ3TL54 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43aQ3TL54 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trim43aQ3TL54 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trim43aQ3TL54 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43aQ3TL54 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43aQ3TL54 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43aQ3TL54 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Trim43aQ3TL54 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43aQ3TL54 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43aQ3TL54 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43aQ3TL54 Gm45058-201ENSMUST00000205810 766 ntBASIC16.81■□□□□ 0.28
Trim43aQ3TL54 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43aQ3TL54 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43aQ3TL54 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43aQ3TL54 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43aQ3TL54 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.8■□□□□ 0.28
Trim43aQ3TL54 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.8■□□□□ 0.28
Trim43aQ3TL54 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43aQ3TL54 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43aQ3TL54 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43aQ3TL54 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43aQ3TL54 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trim43aQ3TL54 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43aQ3TL54 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43aQ3TL54 Gm13474-201ENSMUST00000122466 815 ntBASIC16.8■□□□□ 0.28
Trim43aQ3TL54 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Trim43aQ3TL54 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.8■□□□□ 0.28
Trim43aQ3TL54 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43aQ3TL54 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43aQ3TL54 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43aQ3TL54 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43aQ3TL54 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43aQ3TL54 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43aQ3TL54 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43aQ3TL54 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43aQ3TL54 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms