Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.05■□□□□ -0
Khdc4Q3TCX3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Khdc4Q3TCX3 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.05■□□□□ -0
Khdc4Q3TCX3 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.05■□□□□ -0
Khdc4Q3TCX3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Khdc4Q3TCX3 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.05■□□□□ -0
Khdc4Q3TCX3 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Khdc4Q3TCX3 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Khdc4Q3TCX3 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Khdc4Q3TCX3 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Khdc4Q3TCX3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Khdc4Q3TCX3 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Khdc4Q3TCX3 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Khdc4Q3TCX3 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Khdc4Q3TCX3 Mir5131-201ENSMUST00000175426 93 ntBASIC15.04■□□□□ -0
Khdc4Q3TCX3 Gm27525-201ENSMUST00000184465 107 ntBASIC15.04■□□□□ -0
Khdc4Q3TCX3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.04■□□□□ -0
Khdc4Q3TCX3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Khdc4Q3TCX3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Khdc4Q3TCX3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.04■□□□□ -0
Khdc4Q3TCX3 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.04■□□□□ -0
Khdc4Q3TCX3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Khdc4Q3TCX3 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Khdc4Q3TCX3 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.04■□□□□ -0
Khdc4Q3TCX3 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Khdc4Q3TCX3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Khdc4Q3TCX3 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Khdc4Q3TCX3 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Khdc4Q3TCX3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.03■□□□□ -0
Khdc4Q3TCX3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.03■□□□□ -0
Khdc4Q3TCX3 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Khdc4Q3TCX3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.02■□□□□ -0
Khdc4Q3TCX3 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Khdc4Q3TCX3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Khdc4Q3TCX3 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.02■□□□□ -0
Khdc4Q3TCX3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.02■□□□□ -0
Khdc4Q3TCX3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Khdc4Q3TCX3 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Khdc4Q3TCX3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.02■□□□□ -0
Khdc4Q3TCX3 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Khdc4Q3TCX3 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Khdc4Q3TCX3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Khdc4Q3TCX3 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Khdc4Q3TCX3 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Khdc4Q3TCX3 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.02■□□□□ -0
Khdc4Q3TCX3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Khdc4Q3TCX3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Khdc4Q3TCX3 Gm25745-201ENSMUST00000174945 133 ntBASIC15.02■□□□□ -0
Khdc4Q3TCX3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Khdc4Q3TCX3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.02■□□□□ -0
Khdc4Q3TCX3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Khdc4Q3TCX3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.02■□□□□ -0
Khdc4Q3TCX3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.02■□□□□ -0
Khdc4Q3TCX3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Khdc4Q3TCX3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Khdc4Q3TCX3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Khdc4Q3TCX3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Khdc4Q3TCX3 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Khdc4Q3TCX3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Khdc4Q3TCX3 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Khdc4Q3TCX3 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Khdc4Q3TCX3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Khdc4Q3TCX3 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Khdc4Q3TCX3 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Khdc4Q3TCX3 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Khdc4Q3TCX3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Khdc4Q3TCX3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Khdc4Q3TCX3 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Khdc4Q3TCX3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Khdc4Q3TCX3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms