Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1bP61025 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1bP61025 Gm21596-201ENSMUST00000178049 1316 ntBASIC11.31□□□□□ -0.6
Cks1bP61025 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1bP61025 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1bP61025 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1bP61025 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1bP61025 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1bP61025 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1bP61025 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1bP61025 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1bP61025 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1bP61025 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1bP61025 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1bP61025 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Cks1bP61025 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC11.3□□□□□ -0.6
Cks1bP61025 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Cks1bP61025 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cks1bP61025 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cks1bP61025 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC11.3□□□□□ -0.6
Cks1bP61025 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 Gm4974-201ENSMUST00000209974 875 ntBASIC11.3□□□□□ -0.6
Cks1bP61025 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Cks1bP61025 AC122769.4-201ENSMUST00000228166 901 ntBASIC11.3□□□□□ -0.6
Cks1bP61025 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.3□□□□□ -0.6
Cks1bP61025 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC11.3□□□□□ -0.6
Cks1bP61025 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1bP61025 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC11.29□□□□□ -0.6
Cks1bP61025 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cks1bP61025 Gm13158-201ENSMUST00000122007 736 ntBASIC11.29□□□□□ -0.6
Cks1bP61025 Alkbh1-212ENSMUST00000185301 408 ntBASIC11.29□□□□□ -0.6
Cks1bP61025 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Cks1bP61025 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cks1bP61025 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cks1bP61025 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC11.29□□□□□ -0.6
Cks1bP61025 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.29□□□□□ -0.6
Cks1bP61025 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1bP61025 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1bP61025 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1bP61025 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1bP61025 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms