Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hnf4aP49698 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hnf4aP49698 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hnf4aP49698 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hnf4aP49698 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hnf4aP49698 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hnf4aP49698 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hnf4aP49698 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hnf4aP49698 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hnf4aP49698 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hnf4aP49698 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hnf4aP49698 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hnf4aP49698 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hnf4aP49698 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hnf4aP49698 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hnf4aP49698 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hnf4aP49698 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hnf4aP49698 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hnf4aP49698 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hnf4aP49698 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hnf4aP49698 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hnf4aP49698 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hnf4aP49698 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hnf4aP49698 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hnf4aP49698 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hnf4aP49698 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hnf4aP49698 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hnf4aP49698 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hnf4aP49698 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.35■□□□□ 0.05
Hnf4aP49698 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hnf4aP49698 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hnf4aP49698 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hnf4aP49698 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hnf4aP49698 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hnf4aP49698 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hnf4aP49698 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hnf4aP49698 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hnf4aP49698 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.34■□□□□ 0.05
Hnf4aP49698 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hnf4aP49698 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hnf4aP49698 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hnf4aP49698 Gm15794-201ENSMUST00000120182 631 ntBASIC15.34■□□□□ 0.05
Hnf4aP49698 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.34■□□□□ 0.05
Hnf4aP49698 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.34■□□□□ 0.05
Hnf4aP49698 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hnf4aP49698 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Hnf4aP49698 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hnf4aP49698 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hnf4aP49698 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hnf4aP49698 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hnf4aP49698 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hnf4aP49698 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hnf4aP49698 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hnf4aP49698 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hnf4aP49698 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.34■□□□□ 0.05
Hnf4aP49698 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hnf4aP49698 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hnf4aP49698 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.33■□□□□ 0.05
Hnf4aP49698 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hnf4aP49698 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hnf4aP49698 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
Hnf4aP49698 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hnf4aP49698 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hnf4aP49698 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Hnf4aP49698 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hnf4aP49698 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hnf4aP49698 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hnf4aP49698 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.33■□□□□ 0.04
Hnf4aP49698 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.33■□□□□ 0.04
Hnf4aP49698 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hnf4aP49698 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hnf4aP49698 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Hnf4aP49698 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Hnf4aP49698 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hnf4aP49698 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hnf4aP49698 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hnf4aP49698 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hnf4aP49698 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hnf4aP49698 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hnf4aP49698 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hnf4aP49698 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hnf4aP49698 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hnf4aP49698 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hnf4aP49698 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hnf4aP49698 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.32■□□□□ 0.04
Hnf4aP49698 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.32■□□□□ 0.04
Hnf4aP49698 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hnf4aP49698 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hnf4aP49698 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hnf4aP49698 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Hnf4aP49698 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hnf4aP49698 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.32■□□□□ 0.04
Hnf4aP49698 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.32■□□□□ 0.04
Hnf4aP49698 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hnf4aP49698 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hnf4aP49698 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.32■□□□□ 0.04
Hnf4aP49698 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hnf4aP49698 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hnf4aP49698 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.32■□□□□ 0.04
Hnf4aP49698 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms