Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vcam1P29533 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vcam1P29533 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vcam1P29533 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vcam1P29533 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vcam1P29533 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vcam1P29533 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vcam1P29533 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vcam1P29533 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.12■□□□□ 0.49
Vcam1P29533 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vcam1P29533 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.12■□□□□ 0.49
Vcam1P29533 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Vcam1P29533 Gm5177-201ENSMUST00000183092 997 ntBASIC18.12■□□□□ 0.49
Vcam1P29533 Gm45747-201ENSMUST00000212203 999 ntBASIC18.12■□□□□ 0.49
Vcam1P29533 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vcam1P29533 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vcam1P29533 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vcam1P29533 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vcam1P29533 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vcam1P29533 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vcam1P29533 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.12■□□□□ 0.49
Vcam1P29533 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vcam1P29533 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vcam1P29533 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vcam1P29533 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vcam1P29533 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Vcam1P29533 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vcam1P29533 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vcam1P29533 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vcam1P29533 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vcam1P29533 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vcam1P29533 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Vcam1P29533 Gm26308-201ENSMUST00000157768 69 ntBASIC18.11■□□□□ 0.49
Vcam1P29533 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC18.11■□□□□ 0.49
Vcam1P29533 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vcam1P29533 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vcam1P29533 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Vcam1P29533 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vcam1P29533 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vcam1P29533 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vcam1P29533 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vcam1P29533 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vcam1P29533 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vcam1P29533 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vcam1P29533 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vcam1P29533 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vcam1P29533 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vcam1P29533 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vcam1P29533 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vcam1P29533 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vcam1P29533 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vcam1P29533 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vcam1P29533 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vcam1P29533 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Vcam1P29533 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vcam1P29533 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vcam1P29533 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vcam1P29533 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vcam1P29533 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vcam1P29533 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vcam1P29533 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vcam1P29533 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vcam1P29533 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vcam1P29533 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vcam1P29533 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Vcam1P29533 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vcam1P29533 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.1■□□□□ 0.49
Vcam1P29533 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vcam1P29533 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vcam1P29533 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vcam1P29533 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vcam1P29533 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vcam1P29533 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vcam1P29533 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.09■□□□□ 0.49
Vcam1P29533 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Vcam1P29533 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vcam1P29533 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vcam1P29533 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vcam1P29533 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vcam1P29533 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vcam1P29533 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vcam1P29533 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vcam1P29533 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vcam1P29533 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vcam1P29533 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vcam1P29533 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.09■□□□□ 0.49
Vcam1P29533 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.09■□□□□ 0.49
Vcam1P29533 Gm12892-201ENSMUST00000117367 1146 ntBASIC18.09■□□□□ 0.49
Vcam1P29533 Gm17271-201ENSMUST00000165535 355 ntBASIC18.09■□□□□ 0.49
Vcam1P29533 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.09■□□□□ 0.49
Vcam1P29533 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vcam1P29533 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vcam1P29533 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.09■□□□□ 0.49
Vcam1P29533 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vcam1P29533 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vcam1P29533 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vcam1P29533 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.09■□□□□ 0.49
Vcam1P29533 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.08■□□□□ 0.49
Vcam1P29533 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vcam1P29533 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms