Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp3P28862 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp3P28862 Gm10175-201ENSMUST00000086013 645 ntBASIC16.9■□□□□ 0.3
Mmp3P28862 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.9■□□□□ 0.3
Mmp3P28862 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp3P28862 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp3P28862 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp3P28862 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp3P28862 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp3P28862 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.9■□□□□ 0.3
Mmp3P28862 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Mmp3P28862 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Mmp3P28862 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Mmp3P28862 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp3P28862 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Mmp3P28862 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp3P28862 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp3P28862 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp3P28862 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Mmp3P28862 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp3P28862 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp3P28862 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.89■□□□□ 0.29
Mmp3P28862 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.89■□□□□ 0.29
Mmp3P28862 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.89■□□□□ 0.29
Mmp3P28862 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.89■□□□□ 0.29
Mmp3P28862 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp3P28862 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.89■□□□□ 0.29
Mmp3P28862 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp3P28862 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp3P28862 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp3P28862 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Mmp3P28862 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp3P28862 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp3P28862 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp3P28862 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp3P28862 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp3P28862 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp3P28862 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp3P28862 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp3P28862 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.88■□□□□ 0.29
Mmp3P28862 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp3P28862 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp3P28862 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp3P28862 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Mmp3P28862 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.88■□□□□ 0.29
Mmp3P28862 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Mmp3P28862 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Mmp3P28862 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.88■□□□□ 0.29
Mmp3P28862 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp3P28862 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp3P28862 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp3P28862 Gm25911-201ENSMUST00000157621 56 ntBASIC16.88■□□□□ 0.29
Mmp3P28862 Gm18489-201ENSMUST00000172565 551 ntBASIC16.88■□□□□ 0.29
Mmp3P28862 Mir3113-201ENSMUST00000175478 76 ntBASIC16.88■□□□□ 0.29
Mmp3P28862 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Mmp3P28862 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp3P28862 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp3P28862 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.88■□□□□ 0.29
Mmp3P28862 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.88■□□□□ 0.29
Mmp3P28862 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Mmp3P28862 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp3P28862 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp3P28862 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp3P28862 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp3P28862 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp3P28862 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp3P28862 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp3P28862 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp3P28862 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp3P28862 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp3P28862 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.88■□□□□ 0.29
Mmp3P28862 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp3P28862 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Mmp3P28862 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mmp3P28862 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mmp3P28862 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mmp3P28862 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mmp3P28862 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Mmp3P28862 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mmp3P28862 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Mmp3P28862 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Mmp3P28862 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.87■□□□□ 0.29
Mmp3P28862 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Mmp3P28862 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.87■□□□□ 0.29
Mmp3P28862 Gm6736-201ENSMUST00000166583 948 ntBASIC16.87■□□□□ 0.29
Mmp3P28862 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.87■□□□□ 0.29
Mmp3P28862 Gm7787-201ENSMUST00000216858 688 ntBASIC16.87■□□□□ 0.29
Mmp3P28862 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mmp3P28862 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Mmp3P28862 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mmp3P28862 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.87■□□□□ 0.29
Mmp3P28862 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Mmp3P28862 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Mmp3P28862 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Mmp3P28862 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Mmp3P28862 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Mmp3P28862 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.87■□□□□ 0.29
Mmp3P28862 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mmp3P28862 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mmp3P28862 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms