Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC22.84■■□□□ 1.25
COL11A2P13942 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL11A2P13942 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL11A2P13942 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL11A2P13942 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL11A2P13942 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL11A2P13942 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC22.84■■□□□ 1.25
COL11A2P13942 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC22.83■■□□□ 1.25
COL11A2P13942 CCS-201ENST00000310190 942 ntTSL 5 BASIC22.83■■□□□ 1.25
COL11A2P13942 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
COL11A2P13942 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
COL11A2P13942 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
COL11A2P13942 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC22.83■■□□□ 1.25
COL11A2P13942 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
COL11A2P13942 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC22.83■■□□□ 1.25
COL11A2P13942 AC011840.4-201ENST00000578471 627 ntBASIC22.83■■□□□ 1.25
COL11A2P13942 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
COL11A2P13942 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
COL11A2P13942 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
COL11A2P13942 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.24
COL11A2P13942 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
COL11A2P13942 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
COL11A2P13942 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL11A2P13942 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC22.82■■□□□ 1.24
COL11A2P13942 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC22.82■■□□□ 1.24
COL11A2P13942 AC010327.4-202ENST00000591484 748 ntBASIC22.82■■□□□ 1.24
COL11A2P13942 TERC-201ENST00000602385 541 ntBASIC22.82■■□□□ 1.24
COL11A2P13942 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.82■■□□□ 1.24
COL11A2P13942 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL11A2P13942 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL11A2P13942 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL11A2P13942 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL11A2P13942 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL11A2P13942 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL11A2P13942 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL11A2P13942 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL11A2P13942 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL11A2P13942 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL11A2P13942 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC22.82■■□□□ 1.24
COL11A2P13942 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC22.82■■□□□ 1.24
COL11A2P13942 AP001269.4-201ENST00000609611 512 ntBASIC22.82■■□□□ 1.24
COL11A2P13942 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC22.82■■□□□ 1.24
COL11A2P13942 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL11A2P13942 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL11A2P13942 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC22.82■■□□□ 1.24
COL11A2P13942 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC22.81■■□□□ 1.24
COL11A2P13942 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL11A2P13942 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL11A2P13942 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
COL11A2P13942 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL11A2P13942 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL11A2P13942 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC22.81■■□□□ 1.24
COL11A2P13942 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
COL11A2P13942 PIN1-206ENST00000587625 878 ntTSL 2 BASIC22.81■■□□□ 1.24
COL11A2P13942 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL11A2P13942 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
COL11A2P13942 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC22.81■■□□□ 1.24
COL11A2P13942 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
COL11A2P13942 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.81■■□□□ 1.24
COL11A2P13942 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
COL11A2P13942 AC125437.2-201ENST00000625180 2167 ntBASIC22.81■■□□□ 1.24
COL11A2P13942 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.81■■□□□ 1.24
COL11A2P13942 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL11A2P13942 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL11A2P13942 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL11A2P13942 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.8■■□□□ 1.24
COL11A2P13942 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC22.8■■□□□ 1.24
COL11A2P13942 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
COL11A2P13942 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL11A2P13942 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL11A2P13942 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC22.8■■□□□ 1.24
COL11A2P13942 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC22.8■■□□□ 1.24
COL11A2P13942 AL355877.3-201ENST00000622820 899 ntBASIC22.8■■□□□ 1.24
COL11A2P13942 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL11A2P13942 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL11A2P13942 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC22.8■■□□□ 1.24
COL11A2P13942 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC22.8■■□□□ 1.24
COL11A2P13942 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL11A2P13942 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL11A2P13942 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL11A2P13942 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC22.79■■□□□ 1.24
COL11A2P13942 IRF8-202ENST00000562492 946 ntTSL 3 BASIC22.79■■□□□ 1.24
COL11A2P13942 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
COL11A2P13942 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.79■■□□□ 1.24
COL11A2P13942 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
COL11A2P13942 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC22.79■■□□□ 1.24
COL11A2P13942 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL11A2P13942 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
COL11A2P13942 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC22.79■■□□□ 1.24
COL11A2P13942 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
COL11A2P13942 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
COL11A2P13942 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
COL11A2P13942 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
COL11A2P13942 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC22.79■■□□□ 1.24
COL11A2P13942 CSF3-203ENST00000394148 622 ntTSL 3 BASIC22.79■■□□□ 1.24
COL11A2P13942 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC22.79■■□□□ 1.24
COL11A2P13942 GZMM-202ENST00000592501 941 ntTSL 3 BASIC22.79■■□□□ 1.24
COL11A2P13942 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL11A2P13942 HEIH-201ENST00000623091 1652 ntBASIC22.79■■□□□ 1.24
COL11A2P13942 AL137060.1-201ENST00000618151 2648 ntBASIC22.79■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms