Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm27000-201ENSMUST00000182943 842 ntBASIC13.92□□□□□ -0.18
P04224 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.92□□□□□ -0.18
P04224 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.92□□□□□ -0.18
P04224 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P04224 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P04224 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P04224 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
P04224 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
P04224 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
P04224 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
P04224 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
P04224 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
P04224 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
P04224 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.92□□□□□ -0.18
P04224 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
P04224 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
P04224 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P04224 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
P04224 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
P04224 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
P04224 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P04224 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P04224 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P04224 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P04224 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
P04224 Gm18958-201ENSMUST00000174258 762 ntBASIC13.91□□□□□ -0.18
P04224 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
P04224 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P04224 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.91□□□□□ -0.18
P04224 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
P04224 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P04224 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P04224 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P04224 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P04224 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.91□□□□□ -0.18
P04224 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
P04224 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
P04224 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P04224 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P04224 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
P04224 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
P04224 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
P04224 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
P04224 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.91□□□□□ -0.18
P04224 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P04224 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P04224 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P04224 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P04224 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P04224 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P04224 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P04224 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P04224 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P04224 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.9□□□□□ -0.18
P04224 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P04224 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
P04224 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
P04224 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
P04224 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P04224 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
P04224 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
P04224 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P04224 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P04224 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
P04224 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.9□□□□□ -0.19
P04224 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
P04224 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
P04224 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
P04224 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P04224 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
P04224 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
P04224 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
P04224 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
P04224 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P04224 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P04224 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P04224 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.89□□□□□ -0.19
P04224 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
P04224 Gm5643-201ENSMUST00000117081 966 ntBASIC13.89□□□□□ -0.19
P04224 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
P04224 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
P04224 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.89□□□□□ -0.19
P04224 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.89□□□□□ -0.19
P04224 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.89□□□□□ -0.19
P04224 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P04224 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P04224 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
P04224 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
P04224 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
P04224 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P04224 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
P04224 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P04224 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
P04224 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.89□□□□□ -0.19
P04224 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P04224 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P04224 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.88□□□□□ -0.19
P04224 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P04224 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
P04224 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms