Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6dO55057 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6dO55057 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6dO55057 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6dO55057 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6dO55057 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Pde6dO55057 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6dO55057 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6dO55057 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6dO55057 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6dO55057 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6dO55057 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6dO55057 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6dO55057 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6dO55057 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6dO55057 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6dO55057 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6dO55057 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pde6dO55057 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6dO55057 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6dO55057 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6dO55057 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6dO55057 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6dO55057 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6dO55057 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6dO55057 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6dO55057 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6dO55057 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Pde6dO55057 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.51□□□□□ -0.41
Pde6dO55057 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6dO55057 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pde6dO55057 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6dO55057 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC12.51□□□□□ -0.41
Pde6dO55057 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6dO55057 AV356131-201ENSMUST00000206201 750 ntBASIC12.51□□□□□ -0.41
Pde6dO55057 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.51□□□□□ -0.41
Pde6dO55057 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6dO55057 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6dO55057 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pde6dO55057 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6dO55057 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6dO55057 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6dO55057 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6dO55057 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pde6dO55057 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6dO55057 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6dO55057 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.51□□□□□ -0.41
Pde6dO55057 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6dO55057 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pde6dO55057 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6dO55057 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6dO55057 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.51□□□□□ -0.41
Pde6dO55057 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6dO55057 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pde6dO55057 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6dO55057 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pde6dO55057 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6dO55057 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6dO55057 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6dO55057 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6dO55057 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6dO55057 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6dO55057 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6dO55057 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6dO55057 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pde6dO55057 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6dO55057 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.5□□□□□ -0.41
Pde6dO55057 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6dO55057 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6dO55057 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pde6dO55057 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6dO55057 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6dO55057 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6dO55057 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6dO55057 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6dO55057 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pde6dO55057 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6dO55057 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Pde6dO55057 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pde6dO55057 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6dO55057 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6dO55057 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6dO55057 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.49□□□□□ -0.41
Pde6dO55057 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6dO55057 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6dO55057 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6dO55057 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6dO55057 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6dO55057 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6dO55057 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6dO55057 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6dO55057 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.49□□□□□ -0.41
Pde6dO55057 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6dO55057 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.49□□□□□ -0.41
Pde6dO55057 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.49□□□□□ -0.41
Pde6dO55057 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.49□□□□□ -0.41
Pde6dO55057 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6dO55057 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pde6dO55057 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6dO55057 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms