Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trdmt1O55055 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trdmt1O55055 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trdmt1O55055 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trdmt1O55055 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trdmt1O55055 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trdmt1O55055 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trdmt1O55055 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trdmt1O55055 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trdmt1O55055 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trdmt1O55055 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trdmt1O55055 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trdmt1O55055 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trdmt1O55055 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Trdmt1O55055 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trdmt1O55055 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.35■□□□□ 0.37
Trdmt1O55055 Gm44872-201ENSMUST00000207864 420 ntBASIC17.35■□□□□ 0.37
Trdmt1O55055 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.35■□□□□ 0.37
Trdmt1O55055 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trdmt1O55055 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trdmt1O55055 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trdmt1O55055 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trdmt1O55055 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trdmt1O55055 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trdmt1O55055 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trdmt1O55055 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trdmt1O55055 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trdmt1O55055 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trdmt1O55055 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trdmt1O55055 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Trdmt1O55055 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trdmt1O55055 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trdmt1O55055 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.34■□□□□ 0.37
Trdmt1O55055 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trdmt1O55055 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trdmt1O55055 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.34■□□□□ 0.37
Trdmt1O55055 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.34■□□□□ 0.37
Trdmt1O55055 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trdmt1O55055 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trdmt1O55055 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trdmt1O55055 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trdmt1O55055 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.34■□□□□ 0.37
Trdmt1O55055 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.34■□□□□ 0.37
Trdmt1O55055 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trdmt1O55055 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.34■□□□□ 0.37
Trdmt1O55055 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trdmt1O55055 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trdmt1O55055 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trdmt1O55055 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trdmt1O55055 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trdmt1O55055 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.34■□□□□ 0.37
Trdmt1O55055 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trdmt1O55055 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trdmt1O55055 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trdmt1O55055 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trdmt1O55055 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trdmt1O55055 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Trdmt1O55055 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trdmt1O55055 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trdmt1O55055 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trdmt1O55055 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Trdmt1O55055 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.33■□□□□ 0.36
Trdmt1O55055 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.33■□□□□ 0.36
Trdmt1O55055 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trdmt1O55055 Gm18246-201ENSMUST00000221023 728 ntBASIC17.33■□□□□ 0.36
Trdmt1O55055 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trdmt1O55055 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trdmt1O55055 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.33■□□□□ 0.36
Trdmt1O55055 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trdmt1O55055 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trdmt1O55055 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trdmt1O55055 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trdmt1O55055 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trdmt1O55055 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trdmt1O55055 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trdmt1O55055 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trdmt1O55055 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trdmt1O55055 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trdmt1O55055 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trdmt1O55055 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trdmt1O55055 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trdmt1O55055 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trdmt1O55055 Gm13365-201ENSMUST00000121188 973 ntBASIC17.32■□□□□ 0.36
Trdmt1O55055 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.32■□□□□ 0.36
Trdmt1O55055 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trdmt1O55055 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.32■□□□□ 0.36
Trdmt1O55055 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trdmt1O55055 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trdmt1O55055 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trdmt1O55055 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trdmt1O55055 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.32■□□□□ 0.36
Trdmt1O55055 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trdmt1O55055 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trdmt1O55055 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trdmt1O55055 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trdmt1O55055 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trdmt1O55055 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trdmt1O55055 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trdmt1O55055 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trdmt1O55055 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms