Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Kcnu1O54982 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Kcnu1O54982 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Kcnu1O54982 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Kcnu1O54982 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Kcnu1O54982 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Kcnu1O54982 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Kcnu1O54982 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Kcnu1O54982 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Kcnu1O54982 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Kcnu1O54982 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Kcnu1O54982 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.85■□□□□ 0.29
Kcnu1O54982 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Kcnu1O54982 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Kcnu1O54982 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Kcnu1O54982 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Kcnu1O54982 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Kcnu1O54982 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Kcnu1O54982 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Kcnu1O54982 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Kcnu1O54982 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Kcnu1O54982 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Kcnu1O54982 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.85■□□□□ 0.29
Kcnu1O54982 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Kcnu1O54982 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Kcnu1O54982 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Kcnu1O54982 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.84■□□□□ 0.29
Kcnu1O54982 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Kcnu1O54982 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Kcnu1O54982 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Kcnu1O54982 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Kcnu1O54982 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Kcnu1O54982 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Kcnu1O54982 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.84■□□□□ 0.29
Kcnu1O54982 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.84■□□□□ 0.29
Kcnu1O54982 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.84■□□□□ 0.29
Kcnu1O54982 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Kcnu1O54982 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Kcnu1O54982 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Kcnu1O54982 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Kcnu1O54982 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Kcnu1O54982 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Kcnu1O54982 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Kcnu1O54982 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.84■□□□□ 0.29
Kcnu1O54982 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Kcnu1O54982 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Kcnu1O54982 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Kcnu1O54982 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.84■□□□□ 0.29
Kcnu1O54982 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Kcnu1O54982 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Kcnu1O54982 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.83■□□□□ 0.29
Kcnu1O54982 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
Kcnu1O54982 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Kcnu1O54982 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Kcnu1O54982 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Kcnu1O54982 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Kcnu1O54982 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.83■□□□□ 0.28
Kcnu1O54982 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Kcnu1O54982 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Kcnu1O54982 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Kcnu1O54982 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Kcnu1O54982 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Kcnu1O54982 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Kcnu1O54982 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Kcnu1O54982 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Kcnu1O54982 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Kcnu1O54982 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Kcnu1O54982 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Kcnu1O54982 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Kcnu1O54982 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Kcnu1O54982 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Kcnu1O54982 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Kcnu1O54982 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Kcnu1O54982 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Kcnu1O54982 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Kcnu1O54982 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Kcnu1O54982 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Kcnu1O54982 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Kcnu1O54982 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Kcnu1O54982 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Kcnu1O54982 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Kcnu1O54982 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Kcnu1O54982 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Kcnu1O54982 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Kcnu1O54982 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Kcnu1O54982 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Kcnu1O54982 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Kcnu1O54982 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Kcnu1O54982 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Kcnu1O54982 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Kcnu1O54982 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Kcnu1O54982 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.82■□□□□ 0.28
Kcnu1O54982 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Kcnu1O54982 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Kcnu1O54982 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Kcnu1O54982 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Kcnu1O54982 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.82■□□□□ 0.28
Kcnu1O54982 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Kcnu1O54982 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.82■□□□□ 0.28
Kcnu1O54982 Gm25406-201ENSMUST00000157599 105 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms