Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Gm10154-201ENSMUST00000084445 354 ntBASIC14.78□□□□□ -0.04
Abca4O35600 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Abca4O35600 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abca4O35600 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abca4O35600 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abca4O35600 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Abca4O35600 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Abca4O35600 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.77□□□□□ -0.04
Abca4O35600 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.77□□□□□ -0.04
Abca4O35600 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Abca4O35600 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.77□□□□□ -0.04
Abca4O35600 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.77□□□□□ -0.04
Abca4O35600 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.77□□□□□ -0.04
Abca4O35600 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Abca4O35600 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Abca4O35600 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Abca4O35600 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Abca4O35600 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.77□□□□□ -0.04
Abca4O35600 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Abca4O35600 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Abca4O35600 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Abca4O35600 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Abca4O35600 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Abca4O35600 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Abca4O35600 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Abca4O35600 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Abca4O35600 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Abca4O35600 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Abca4O35600 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Abca4O35600 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.77□□□□□ -0.05
Abca4O35600 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Abca4O35600 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Abca4O35600 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Abca4O35600 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Abca4O35600 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Abca4O35600 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Abca4O35600 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Abca4O35600 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Abca4O35600 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Abca4O35600 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Abca4O35600 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Abca4O35600 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.76□□□□□ -0.05
Abca4O35600 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.76□□□□□ -0.05
Abca4O35600 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Abca4O35600 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.76□□□□□ -0.05
Abca4O35600 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Abca4O35600 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Abca4O35600 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Abca4O35600 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Abca4O35600 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.76□□□□□ -0.05
Abca4O35600 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Abca4O35600 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Abca4O35600 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Abca4O35600 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.76□□□□□ -0.05
Abca4O35600 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Abca4O35600 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.76□□□□□ -0.05
Abca4O35600 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Abca4O35600 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Abca4O35600 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Abca4O35600 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Abca4O35600 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Abca4O35600 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.76□□□□□ -0.05
Abca4O35600 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Abca4O35600 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Abca4O35600 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Abca4O35600 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Abca4O35600 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Abca4O35600 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Abca4O35600 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.75□□□□□ -0.05
Abca4O35600 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.75□□□□□ -0.05
Abca4O35600 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Abca4O35600 Gm18049-201ENSMUST00000208909 581 ntBASIC14.75□□□□□ -0.05
Abca4O35600 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Abca4O35600 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Abca4O35600 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Abca4O35600 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Abca4O35600 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Abca4O35600 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Abca4O35600 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Abca4O35600 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Abca4O35600 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Abca4O35600 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Abca4O35600 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Abca4O35600 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Abca4O35600 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Abca4O35600 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abca4O35600 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.74□□□□□ -0.05
Abca4O35600 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Abca4O35600 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Abca4O35600 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abca4O35600 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.74□□□□□ -0.05
Abca4O35600 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abca4O35600 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abca4O35600 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abca4O35600 Gm9824-201ENSMUST00000178707 561 ntBASIC14.74□□□□□ -0.05
Abca4O35600 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.74□□□□□ -0.05
Abca4O35600 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.74□□□□□ -0.05
Abca4O35600 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Abca4O35600 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Abca4O35600 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms