Protein–RNA interactions for Protein: O08540

Msmb, Beta-microseminoprotein, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MsmbO08540 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MsmbO08540 Gm44771-201ENSMUST00000206975 626 ntBASIC12.19□□□□□ -0.46
MsmbO08540 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.19□□□□□ -0.46
MsmbO08540 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.19□□□□□ -0.46
MsmbO08540 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.19□□□□□ -0.46
MsmbO08540 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MsmbO08540 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MsmbO08540 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
MsmbO08540 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
MsmbO08540 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
MsmbO08540 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
MsmbO08540 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
MsmbO08540 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MsmbO08540 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
MsmbO08540 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
MsmbO08540 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.19□□□□□ -0.46
MsmbO08540 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
MsmbO08540 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MsmbO08540 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
MsmbO08540 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.19□□□□□ -0.46
MsmbO08540 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MsmbO08540 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
MsmbO08540 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MsmbO08540 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MsmbO08540 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
MsmbO08540 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
MsmbO08540 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MsmbO08540 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MsmbO08540 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.18□□□□□ -0.46
MsmbO08540 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.18□□□□□ -0.46
MsmbO08540 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
MsmbO08540 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
MsmbO08540 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MsmbO08540 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MsmbO08540 Gm44357-201ENSMUST00000195897 142 ntBASIC12.18□□□□□ -0.46
MsmbO08540 Gm19658-201ENSMUST00000196231 138 ntBASIC12.18□□□□□ -0.46
MsmbO08540 Gm44367-201ENSMUST00000196836 138 ntBASIC12.18□□□□□ -0.46
MsmbO08540 Gm44350-201ENSMUST00000197197 138 ntBASIC12.18□□□□□ -0.46
MsmbO08540 Gm44390-201ENSMUST00000197533 144 ntBASIC12.18□□□□□ -0.46
MsmbO08540 Gm44313-201ENSMUST00000198018 138 ntBASIC12.18□□□□□ -0.46
MsmbO08540 Gm44486-201ENSMUST00000198508 138 ntBASIC12.18□□□□□ -0.46
MsmbO08540 Gm44314-201ENSMUST00000199263 138 ntBASIC12.18□□□□□ -0.46
MsmbO08540 Gm44394-201ENSMUST00000199558 138 ntBASIC12.18□□□□□ -0.46
MsmbO08540 Gm44484-201ENSMUST00000199873 138 ntBASIC12.18□□□□□ -0.46
MsmbO08540 Gm44466-201ENSMUST00000200264 138 ntBASIC12.18□□□□□ -0.46
MsmbO08540 Gm44359-201ENSMUST00000200671 138 ntBASIC12.18□□□□□ -0.46
MsmbO08540 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.18□□□□□ -0.46
MsmbO08540 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.18□□□□□ -0.46
MsmbO08540 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MsmbO08540 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
MsmbO08540 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
MsmbO08540 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MsmbO08540 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MsmbO08540 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
MsmbO08540 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
MsmbO08540 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MsmbO08540 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MsmbO08540 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
MsmbO08540 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
MsmbO08540 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MsmbO08540 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MsmbO08540 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MsmbO08540 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
MsmbO08540 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MsmbO08540 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
MsmbO08540 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
MsmbO08540 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MsmbO08540 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
MsmbO08540 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
MsmbO08540 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MsmbO08540 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.17□□□□□ -0.46
MsmbO08540 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MsmbO08540 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
MsmbO08540 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MsmbO08540 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MsmbO08540 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.17□□□□□ -0.46
MsmbO08540 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
MsmbO08540 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
MsmbO08540 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.17□□□□□ -0.46
MsmbO08540 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.17□□□□□ -0.46
MsmbO08540 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
MsmbO08540 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.17□□□□□ -0.46
MsmbO08540 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
MsmbO08540 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.17□□□□□ -0.46
MsmbO08540 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.17□□□□□ -0.46
MsmbO08540 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MsmbO08540 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
MsmbO08540 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
MsmbO08540 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
MsmbO08540 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MsmbO08540 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MsmbO08540 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MsmbO08540 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
MsmbO08540 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.17□□□□□ -0.46
MsmbO08540 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MsmbO08540 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
MsmbO08540 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
MsmbO08540 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MsmbO08540 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.17□□□□□ -0.46
MsmbO08540 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms