Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9d-4A0A0G2JG37 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9d-4A0A0G2JG37 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9d-4A0A0G2JG37 Gm37305-201ENSMUST00000195714 4279 ntBASIC10.87□□□□□ -0.67
Trav9d-4A0A0G2JG37 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trav9d-4A0A0G2JG37 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9d-4A0A0G2JG37 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Trav9d-4A0A0G2JG37 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9d-4A0A0G2JG37 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9d-4A0A0G2JG37 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav9d-4A0A0G2JG37 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9d-4A0A0G2JG37 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9d-4A0A0G2JG37 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trav9d-4A0A0G2JG37 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9d-4A0A0G2JG37 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Trav9d-4A0A0G2JG37 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9d-4A0A0G2JG37 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trav9d-4A0A0G2JG37 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9d-4A0A0G2JG37 Gm20049-201ENSMUST00000219950 730 ntBASIC10.87□□□□□ -0.67
Trav9d-4A0A0G2JG37 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9d-4A0A0G2JG37 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9d-4A0A0G2JG37 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trav9d-4A0A0G2JG37 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9d-4A0A0G2JG37 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9d-4A0A0G2JG37 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9d-4A0A0G2JG37 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9d-4A0A0G2JG37 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trav9d-4A0A0G2JG37 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9d-4A0A0G2JG37 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9d-4A0A0G2JG37 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trav9d-4A0A0G2JG37 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9d-4A0A0G2JG37 Gm37812-201ENSMUST00000195216 2475 ntBASIC10.86□□□□□ -0.67
Trav9d-4A0A0G2JG37 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9d-4A0A0G2JG37 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Trav9d-4A0A0G2JG37 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Trav9d-4A0A0G2JG37 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9d-4A0A0G2JG37 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9d-4A0A0G2JG37 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9d-4A0A0G2JG37 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9d-4A0A0G2JG37 Nrn1-203ENSMUST00000223611 1443 ntBASIC10.86□□□□□ -0.67
Trav9d-4A0A0G2JG37 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9d-4A0A0G2JG37 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav9d-4A0A0G2JG37 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC10.86□□□□□ -0.67
Trav9d-4A0A0G2JG37 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trav9d-4A0A0G2JG37 Gm27275-201ENSMUST00000184318 272 ntBASIC10.86□□□□□ -0.67
Trav9d-4A0A0G2JG37 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9d-4A0A0G2JG37 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9d-4A0A0G2JG37 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9d-4A0A0G2JG37 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Trav9d-4A0A0G2JG37 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9d-4A0A0G2JG37 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9d-4A0A0G2JG37 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9d-4A0A0G2JG37 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9d-4A0A0G2JG37 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9d-4A0A0G2JG37 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Trav9d-4A0A0G2JG37 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9d-4A0A0G2JG37 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9d-4A0A0G2JG37 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Trav9d-4A0A0G2JG37 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Trmt13-210ENSMUST00000198454 880 ntBASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Gm43183-201ENSMUST00000200632 547 ntBASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 AC124581.1-201ENSMUST00000225416 1399 ntBASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms