Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Ighv1-47A0A0A6YY41 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-47A0A0A6YY41 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-47A0A0A6YY41 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-47A0A0A6YY41 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-47A0A0A6YY41 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-47A0A0A6YY41 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-47A0A0A6YY41 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Mir770-201ENSMUST00000103252 94 ntBASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ighv1-47A0A0A6YY41 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ighv1-47A0A0A6YY41 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ighv1-47A0A0A6YY41 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Ighv1-47A0A0A6YY41 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ighv1-47A0A0A6YY41 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Gm10052-201ENSMUST00000168019 960 ntBASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Gm6623-201ENSMUST00000173570 544 ntBASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Gm7729-201ENSMUST00000050143 801 ntBASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ighv1-47A0A0A6YY41 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Ighv1-47A0A0A6YY41 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-47A0A0A6YY41 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ighv1-47A0A0A6YY41 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.07□□□□□ -0.32
Ighv1-47A0A0A6YY41 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Ighv1-47A0A0A6YY41 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-47A0A0A6YY41 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-47A0A0A6YY41 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-47A0A0A6YY41 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-47A0A0A6YY41 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-47A0A0A6YY41 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Ighv1-47A0A0A6YY41 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.07□□□□□ -0.32
Ighv1-47A0A0A6YY41 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-47A0A0A6YY41 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Ighv1-47A0A0A6YY41 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-47A0A0A6YY41 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-47A0A0A6YY41 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-47A0A0A6YY41 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-47A0A0A6YY41 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-47A0A0A6YY41 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-47A0A0A6YY41 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.07□□□□□ -0.32
Ighv1-47A0A0A6YY41 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-47A0A0A6YY41 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms