Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-5A0A075B6B9 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 Gm11336-201ENSMUST00000118168 334 ntBASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-5A0A075B6B9 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Sybu-209ENSMUST00000228639 4113 ntBASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Mir1199-201ENSMUST00000117015 119 ntBASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-5A0A075B6B9 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms