Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Gm38042-201ENSMUST00000191614 5208 ntBASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Gm43808-201ENSMUST00000202534 2065 ntBASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Gm43935-201ENSMUST00000203569 1050 ntBASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Gm45683-201ENSMUST00000210825 1247 ntBASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sec61bQ9CQS8 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Gm37785-201ENSMUST00000195783 2408 ntBASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Gm27525-201ENSMUST00000184465 107 ntBASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Gm15590-201ENSMUST00000078419 552 ntBASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Sec61bQ9CQS8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms