Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pcdha2Q91Y17 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha2Q91Y17 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha2Q91Y17 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha2Q91Y17 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha2Q91Y17 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha2Q91Y17 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.87■□□□□ 0.29
Pcdha2Q91Y17 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pcdha2Q91Y17 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha2Q91Y17 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Pcdha2Q91Y17 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha2Q91Y17 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.87■□□□□ 0.29
Pcdha2Q91Y17 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha2Q91Y17 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha2Q91Y17 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha2Q91Y17 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha2Q91Y17 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha2Q91Y17 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha2Q91Y17 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha2Q91Y17 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha2Q91Y17 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Pcdha2Q91Y17 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha2Q91Y17 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
Pcdha2Q91Y17 Gm27646-201ENSMUST00000183989 110 ntBASIC16.86■□□□□ 0.29
Pcdha2Q91Y17 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.86■□□□□ 0.29
Pcdha2Q91Y17 Gm6089-201ENSMUST00000197666 938 ntBASIC16.86■□□□□ 0.29
Pcdha2Q91Y17 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha2Q91Y17 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha2Q91Y17 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha2Q91Y17 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha2Q91Y17 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha2Q91Y17 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.86■□□□□ 0.29
Pcdha2Q91Y17 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha2Q91Y17 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha2Q91Y17 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha2Q91Y17 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha2Q91Y17 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Pcdha2Q91Y17 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha2Q91Y17 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha2Q91Y17 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha2Q91Y17 Gm8344-201ENSMUST00000119813 856 ntBASIC16.85■□□□□ 0.29
Pcdha2Q91Y17 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha2Q91Y17 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.85■□□□□ 0.29
Pcdha2Q91Y17 Gm7461-201ENSMUST00000058918 827 ntBASIC16.85■□□□□ 0.29
Pcdha2Q91Y17 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha2Q91Y17 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha2Q91Y17 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha2Q91Y17 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha2Q91Y17 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha2Q91Y17 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha2Q91Y17 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.85■□□□□ 0.29
Pcdha2Q91Y17 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha2Q91Y17 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha2Q91Y17 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha2Q91Y17 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha2Q91Y17 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha2Q91Y17 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha2Q91Y17 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha2Q91Y17 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha2Q91Y17 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.84■□□□□ 0.29
Pcdha2Q91Y17 Gm19164-201ENSMUST00000210667 640 ntBASIC16.84■□□□□ 0.29
Pcdha2Q91Y17 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.84■□□□□ 0.29
Pcdha2Q91Y17 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha2Q91Y17 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha2Q91Y17 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha2Q91Y17 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha2Q91Y17 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Pcdha2Q91Y17 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha2Q91Y17 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.84■□□□□ 0.29
Pcdha2Q91Y17 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha2Q91Y17 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Pcdha2Q91Y17 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdha2Q91Y17 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.84■□□□□ 0.29
Pcdha2Q91Y17 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha2Q91Y17 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha2Q91Y17 App-207ENSMUST00000227737 2827 ntBASIC16.83■□□□□ 0.29
Pcdha2Q91Y17 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdha2Q91Y17 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdha2Q91Y17 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdha2Q91Y17 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdha2Q91Y17 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Pcdha2Q91Y17 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha2Q91Y17 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha2Q91Y17 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha2Q91Y17 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.83■□□□□ 0.28
Pcdha2Q91Y17 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.83■□□□□ 0.28
Pcdha2Q91Y17 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.83■□□□□ 0.28
Pcdha2Q91Y17 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha2Q91Y17 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha2Q91Y17 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha2Q91Y17 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha2Q91Y17 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha2Q91Y17 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha2Q91Y17 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha2Q91Y17 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha2Q91Y17 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pcdha2Q91Y17 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha2Q91Y17 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha2Q91Y17 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha2Q91Y17 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms