Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb1Q91Y08 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb1Q91Y08 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb1Q91Y08 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb1Q91Y08 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb1Q91Y08 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb1Q91Y08 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb1Q91Y08 App-207ENSMUST00000227737 2827 ntBASIC16.49■□□□□ 0.23
Pcdhb1Q91Y08 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb1Q91Y08 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb1Q91Y08 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb1Q91Y08 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Pcdhb1Q91Y08 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb1Q91Y08 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb1Q91Y08 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb1Q91Y08 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb1Q91Y08 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb1Q91Y08 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb1Q91Y08 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb1Q91Y08 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Pcdhb1Q91Y08 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb1Q91Y08 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdhb1Q91Y08 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdhb1Q91Y08 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdhb1Q91Y08 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb1Q91Y08 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb1Q91Y08 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb1Q91Y08 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb1Q91Y08 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb1Q91Y08 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb1Q91Y08 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb1Q91Y08 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb1Q91Y08 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb1Q91Y08 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb1Q91Y08 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb1Q91Y08 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb1Q91Y08 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Pcdhb1Q91Y08 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb1Q91Y08 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb1Q91Y08 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb1Q91Y08 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb1Q91Y08 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.47■□□□□ 0.23
Pcdhb1Q91Y08 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb1Q91Y08 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhb1Q91Y08 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb1Q91Y08 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb1Q91Y08 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb1Q91Y08 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb1Q91Y08 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdhb1Q91Y08 Gm21362-201ENSMUST00000194272 928 ntBASIC16.47■□□□□ 0.23
Pcdhb1Q91Y08 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb1Q91Y08 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb1Q91Y08 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb1Q91Y08 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb1Q91Y08 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.47■□□□□ 0.23
Pcdhb1Q91Y08 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb1Q91Y08 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb1Q91Y08 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhb1Q91Y08 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb1Q91Y08 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb1Q91Y08 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb1Q91Y08 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Pcdhb1Q91Y08 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb1Q91Y08 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb1Q91Y08 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb1Q91Y08 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb1Q91Y08 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb1Q91Y08 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb1Q91Y08 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb1Q91Y08 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb1Q91Y08 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb1Q91Y08 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb1Q91Y08 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb1Q91Y08 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb1Q91Y08 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.46■□□□□ 0.23
Pcdhb1Q91Y08 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Pcdhb1Q91Y08 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Pcdhb1Q91Y08 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Pcdhb1Q91Y08 Gm27357-201ENSMUST00000183754 135 ntBASIC16.46■□□□□ 0.23
Pcdhb1Q91Y08 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.46■□□□□ 0.23
Pcdhb1Q91Y08 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb1Q91Y08 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb1Q91Y08 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb1Q91Y08 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb1Q91Y08 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Pcdhb1Q91Y08 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb1Q91Y08 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb1Q91Y08 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdhb1Q91Y08 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.46■□□□□ 0.22
Pcdhb1Q91Y08 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdhb1Q91Y08 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb1Q91Y08 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb1Q91Y08 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb1Q91Y08 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb1Q91Y08 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb1Q91Y08 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb1Q91Y08 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb1Q91Y08 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb1Q91Y08 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb1Q91Y08 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms