Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Retreg1dQ8VE91 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Retreg1dQ8VE91 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.72■□□□□ 0.11
Retreg1dQ8VE91 Gm44771-201ENSMUST00000206975 626 ntBASIC15.72■□□□□ 0.11
Retreg1dQ8VE91 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retreg1dQ8VE91 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retreg1dQ8VE91 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retreg1dQ8VE91 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.72■□□□□ 0.11
Retreg1dQ8VE91 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retreg1dQ8VE91 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retreg1dQ8VE91 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retreg1dQ8VE91 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retreg1dQ8VE91 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retreg1dQ8VE91 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Retreg1dQ8VE91 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retreg1dQ8VE91 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retreg1dQ8VE91 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.72■□□□□ 0.11
Retreg1dQ8VE91 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retreg1dQ8VE91 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retreg1dQ8VE91 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retreg1dQ8VE91 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg1dQ8VE91 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg1dQ8VE91 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg1dQ8VE91 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg1dQ8VE91 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg1dQ8VE91 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Retreg1dQ8VE91 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg1dQ8VE91 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg1dQ8VE91 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg1dQ8VE91 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Retreg1dQ8VE91 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg1dQ8VE91 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg1dQ8VE91 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg1dQ8VE91 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg1dQ8VE91 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg1dQ8VE91 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg1dQ8VE91 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg1dQ8VE91 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Retreg1dQ8VE91 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Retreg1dQ8VE91 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Retreg1dQ8VE91 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Retreg1dQ8VE91 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.7■□□□□ 0.1
Retreg1dQ8VE91 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg1dQ8VE91 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg1dQ8VE91 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg1dQ8VE91 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg1dQ8VE91 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg1dQ8VE91 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg1dQ8VE91 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Retreg1dQ8VE91 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg1dQ8VE91 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg1dQ8VE91 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Retreg1dQ8VE91 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg1dQ8VE91 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Retreg1dQ8VE91 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.7■□□□□ 0.1
Retreg1dQ8VE91 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.7■□□□□ 0.1
Retreg1dQ8VE91 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.7■□□□□ 0.1
Retreg1dQ8VE91 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.7■□□□□ 0.1
Retreg1dQ8VE91 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg1dQ8VE91 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Retreg1dQ8VE91 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg1dQ8VE91 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg1dQ8VE91 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg1dQ8VE91 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Retreg1dQ8VE91 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg1dQ8VE91 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Retreg1dQ8VE91 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Retreg1dQ8VE91 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg1dQ8VE91 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg1dQ8VE91 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg1dQ8VE91 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg1dQ8VE91 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Retreg1dQ8VE91 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg1dQ8VE91 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Retreg1dQ8VE91 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg1dQ8VE91 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg1dQ8VE91 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg1dQ8VE91 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg1dQ8VE91 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.69■□□□□ 0.1
Retreg1dQ8VE91 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg1dQ8VE91 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.69■□□□□ 0.1
Retreg1dQ8VE91 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.69■□□□□ 0.1
Retreg1dQ8VE91 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Retreg1dQ8VE91 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg1dQ8VE91 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg1dQ8VE91 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg1dQ8VE91 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg1dQ8VE91 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg1dQ8VE91 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Retreg1dQ8VE91 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retreg1dQ8VE91 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retreg1dQ8VE91 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retreg1dQ8VE91 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retreg1dQ8VE91 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retreg1dQ8VE91 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retreg1dQ8VE91 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Retreg1dQ8VE91 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retreg1dQ8VE91 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retreg1dQ8VE91 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retreg1dQ8VE91 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms