Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf8Q8VC56 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Gm11336-201ENSMUST00000118168 334 ntBASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf8Q8VC56 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rnf8Q8VC56 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf8Q8VC56 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf8Q8VC56 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rnf8Q8VC56 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.3■□□□□ 0.04
Rnf8Q8VC56 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf8Q8VC56 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.3■□□□□ 0.04
Rnf8Q8VC56 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf8Q8VC56 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf8Q8VC56 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Rnf8Q8VC56 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf8Q8VC56 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf8Q8VC56 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf8Q8VC56 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf8Q8VC56 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf8Q8VC56 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rnf8Q8VC56 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf8Q8VC56 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf8Q8VC56 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf8Q8VC56 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf8Q8VC56 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rnf8Q8VC56 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf8Q8VC56 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf8Q8VC56 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf8Q8VC56 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf8Q8VC56 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf8Q8VC56 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf8Q8VC56 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.29■□□□□ 0.04
Rnf8Q8VC56 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Rnf8Q8VC56 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms