Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Chrna3Q8R4G9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Gm18195-201ENSMUST00000207604 706 ntBASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chrna3Q8R4G9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Chrna3Q8R4G9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chrna3Q8R4G9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.53■□□□□ 0.08
Chrna3Q8R4G9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chrna3Q8R4G9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chrna3Q8R4G9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chrna3Q8R4G9 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chrna3Q8R4G9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chrna3Q8R4G9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chrna3Q8R4G9 Gm7862-201ENSMUST00000121461 292 ntBASIC15.53■□□□□ 0.08
Chrna3Q8R4G9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Chrna3Q8R4G9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.53■□□□□ 0.08
Chrna3Q8R4G9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chrna3Q8R4G9 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Chrna3Q8R4G9 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
Chrna3Q8R4G9 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
Chrna3Q8R4G9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Chrna3Q8R4G9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chrna3Q8R4G9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chrna3Q8R4G9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chrna3Q8R4G9 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chrna3Q8R4G9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chrna3Q8R4G9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chrna3Q8R4G9 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chrna3Q8R4G9 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chrna3Q8R4G9 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chrna3Q8R4G9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Gm8097-201ENSMUST00000117903 829 ntBASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Gm4535-201ENSMUST00000182274 558 ntBASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Gm8825-201ENSMUST00000182565 998 ntBASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Gm4518-201ENSMUST00000182638 718 ntBASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms