Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgcs1Q8JZK9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgcs1Q8JZK9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.18■□□□□ 0.02
Hmgcs1Q8JZK9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgcs1Q8JZK9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgcs1Q8JZK9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Hmgcs1Q8JZK9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgcs1Q8JZK9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Hmgcs1Q8JZK9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Hmgcs1Q8JZK9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgcs1Q8JZK9 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Hmgcs1Q8JZK9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgcs1Q8JZK9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgcs1Q8JZK9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgcs1Q8JZK9 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgcs1Q8JZK9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Hmgcs1Q8JZK9 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgcs1Q8JZK9 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgcs1Q8JZK9 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgcs1Q8JZK9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgcs1Q8JZK9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Hmgcs1Q8JZK9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgcs1Q8JZK9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgcs1Q8JZK9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgcs1Q8JZK9 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Hmgcs1Q8JZK9 Gm10013-201ENSMUST00000106074 672 ntBASIC15.16■□□□□ 0.02
Hmgcs1Q8JZK9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.16■□□□□ 0.02
Hmgcs1Q8JZK9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.16■□□□□ 0.02
Hmgcs1Q8JZK9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.16■□□□□ 0.02
Hmgcs1Q8JZK9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgcs1Q8JZK9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgcs1Q8JZK9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgcs1Q8JZK9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgcs1Q8JZK9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Hmgcs1Q8JZK9 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgcs1Q8JZK9 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgcs1Q8JZK9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.16■□□□□ 0.02
Hmgcs1Q8JZK9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgcs1Q8JZK9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgcs1Q8JZK9 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgcs1Q8JZK9 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmgcs1Q8JZK9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Hmgcs1Q8JZK9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgcs1Q8JZK9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgcs1Q8JZK9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgcs1Q8JZK9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgcs1Q8JZK9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgcs1Q8JZK9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.15■□□□□ 0.02
Hmgcs1Q8JZK9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgcs1Q8JZK9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgcs1Q8JZK9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgcs1Q8JZK9 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgcs1Q8JZK9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Hmgcs1Q8JZK9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgcs1Q8JZK9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgcs1Q8JZK9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Hmgcs1Q8JZK9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgcs1Q8JZK9 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.15■□□□□ 0.02
Hmgcs1Q8JZK9 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.15■□□□□ 0.02
Hmgcs1Q8JZK9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgcs1Q8JZK9 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgcs1Q8JZK9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.15■□□□□ 0.02
Hmgcs1Q8JZK9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.15■□□□□ 0.02
Hmgcs1Q8JZK9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgcs1Q8JZK9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Hmgcs1Q8JZK9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Hmgcs1Q8JZK9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgcs1Q8JZK9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgcs1Q8JZK9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms