Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc2Q8CG48 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.18■□□□□ 0.5
Smc2Q8CG48 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc2Q8CG48 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Smc2Q8CG48 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smc2Q8CG48 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc2Q8CG48 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc2Q8CG48 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc2Q8CG48 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc2Q8CG48 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc2Q8CG48 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Smc2Q8CG48 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smc2Q8CG48 Mir6404-201ENSMUST00000183699 94 ntBASIC18.17■□□□□ 0.5
Smc2Q8CG48 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc2Q8CG48 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc2Q8CG48 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc2Q8CG48 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.17■□□□□ 0.5
Smc2Q8CG48 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc2Q8CG48 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Smc2Q8CG48 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smc2Q8CG48 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smc2Q8CG48 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc2Q8CG48 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc2Q8CG48 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Smc2Q8CG48 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc2Q8CG48 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc2Q8CG48 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc2Q8CG48 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smc2Q8CG48 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Smc2Q8CG48 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smc2Q8CG48 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc2Q8CG48 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Smc2Q8CG48 Gm44443-201ENSMUST00000204396 5633 ntBASIC18.16■□□□□ 0.5
Smc2Q8CG48 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Smc2Q8CG48 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smc2Q8CG48 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.16■□□□□ 0.5
Smc2Q8CG48 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.16■□□□□ 0.5
Smc2Q8CG48 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Smc2Q8CG48 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.16■□□□□ 0.5
Smc2Q8CG48 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc2Q8CG48 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc2Q8CG48 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc2Q8CG48 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc2Q8CG48 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smc2Q8CG48 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc2Q8CG48 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.16■□□□□ 0.5
Smc2Q8CG48 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Smc2Q8CG48 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc2Q8CG48 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc2Q8CG48 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc2Q8CG48 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.15■□□□□ 0.5
Smc2Q8CG48 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc2Q8CG48 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc2Q8CG48 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smc2Q8CG48 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc2Q8CG48 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Smc2Q8CG48 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smc2Q8CG48 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smc2Q8CG48 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smc2Q8CG48 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Smc2Q8CG48 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Smc2Q8CG48 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc2Q8CG48 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc2Q8CG48 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc2Q8CG48 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smc2Q8CG48 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc2Q8CG48 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc2Q8CG48 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Smc2Q8CG48 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smc2Q8CG48 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.14■□□□□ 0.5
Smc2Q8CG48 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Smc2Q8CG48 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Smc2Q8CG48 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Smc2Q8CG48 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Smc2Q8CG48 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Smc2Q8CG48 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc2Q8CG48 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Smc2Q8CG48 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc2Q8CG48 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc2Q8CG48 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc2Q8CG48 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Smc2Q8CG48 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc2Q8CG48 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Smc2Q8CG48 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smc2Q8CG48 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc2Q8CG48 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Smc2Q8CG48 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc2Q8CG48 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc2Q8CG48 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc2Q8CG48 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc2Q8CG48 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc2Q8CG48 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc2Q8CG48 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smc2Q8CG48 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc2Q8CG48 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Smc2Q8CG48 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Smc2Q8CG48 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc2Q8CG48 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smc2Q8CG48 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc2Q8CG48 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms