Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc38Q8CDN8 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc38Q8CDN8 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Ccdc38Q8CDN8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc38Q8CDN8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc38Q8CDN8 Gm11950-201ENSMUST00000121615 838 ntBASIC17.64■□□□□ 0.41
Ccdc38Q8CDN8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc38Q8CDN8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc38Q8CDN8 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ccdc38Q8CDN8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc38Q8CDN8 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ccdc38Q8CDN8 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.64■□□□□ 0.41
Ccdc38Q8CDN8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.64■□□□□ 0.41
Ccdc38Q8CDN8 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc38Q8CDN8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc38Q8CDN8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc38Q8CDN8 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc38Q8CDN8 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.64■□□□□ 0.41
Ccdc38Q8CDN8 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc38Q8CDN8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc38Q8CDN8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc38Q8CDN8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc38Q8CDN8 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.64■□□□□ 0.41
Ccdc38Q8CDN8 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc38Q8CDN8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc38Q8CDN8 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc38Q8CDN8 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc38Q8CDN8 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.63■□□□□ 0.41
Ccdc38Q8CDN8 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.63■□□□□ 0.41
Ccdc38Q8CDN8 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.63■□□□□ 0.41
Ccdc38Q8CDN8 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc38Q8CDN8 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc38Q8CDN8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc38Q8CDN8 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc38Q8CDN8 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc38Q8CDN8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.63■□□□□ 0.41
Ccdc38Q8CDN8 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc38Q8CDN8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc38Q8CDN8 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc38Q8CDN8 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc38Q8CDN8 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ccdc38Q8CDN8 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc38Q8CDN8 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc38Q8CDN8 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc38Q8CDN8 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc38Q8CDN8 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc38Q8CDN8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ccdc38Q8CDN8 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc38Q8CDN8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc38Q8CDN8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc38Q8CDN8 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc38Q8CDN8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc38Q8CDN8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Ccdc38Q8CDN8 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc38Q8CDN8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc38Q8CDN8 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.62■□□□□ 0.41
Ccdc38Q8CDN8 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.62■□□□□ 0.41
Ccdc38Q8CDN8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc38Q8CDN8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc38Q8CDN8 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ccdc38Q8CDN8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.62■□□□□ 0.41
Ccdc38Q8CDN8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc38Q8CDN8 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc38Q8CDN8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.62■□□□□ 0.41
Ccdc38Q8CDN8 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc38Q8CDN8 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ccdc38Q8CDN8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ccdc38Q8CDN8 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc38Q8CDN8 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc38Q8CDN8 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc38Q8CDN8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Ccdc38Q8CDN8 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc38Q8CDN8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc38Q8CDN8 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc38Q8CDN8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc38Q8CDN8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc38Q8CDN8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc38Q8CDN8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc38Q8CDN8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc38Q8CDN8 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc38Q8CDN8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc38Q8CDN8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc38Q8CDN8 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc38Q8CDN8 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc38Q8CDN8 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc38Q8CDN8 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc38Q8CDN8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc38Q8CDN8 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc38Q8CDN8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.6■□□□□ 0.41
Ccdc38Q8CDN8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc38Q8CDN8 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc38Q8CDN8 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc38Q8CDN8 Gm25016-201ENSMUST00000158399 131 ntBASIC17.6■□□□□ 0.41
Ccdc38Q8CDN8 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc38Q8CDN8 Gm29518-201ENSMUST00000190858 372 ntBASIC17.6■□□□□ 0.41
Ccdc38Q8CDN8 Gm17808-201ENSMUST00000200859 894 ntBASIC17.6■□□□□ 0.41
Ccdc38Q8CDN8 Gm45328-201ENSMUST00000210942 917 ntBASIC17.6■□□□□ 0.41
Ccdc38Q8CDN8 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc38Q8CDN8 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc38Q8CDN8 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms