Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Uba3Q8C878 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Uba3Q8C878 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Uba3Q8C878 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Uba3Q8C878 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Uba3Q8C878 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Uba3Q8C878 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Uba3Q8C878 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Uba3Q8C878 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Uba3Q8C878 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Uba3Q8C878 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Uba3Q8C878 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Uba3Q8C878 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Uba3Q8C878 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Uba3Q8C878 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.7■□□□□ 0.26
Uba3Q8C878 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Uba3Q8C878 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Uba3Q8C878 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Uba3Q8C878 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Uba3Q8C878 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Uba3Q8C878 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.7■□□□□ 0.26
Uba3Q8C878 Birc2-201ENSMUST00000054878 378 ntBASIC16.7■□□□□ 0.26
Uba3Q8C878 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Uba3Q8C878 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Uba3Q8C878 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Uba3Q8C878 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Uba3Q8C878 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Uba3Q8C878 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Uba3Q8C878 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Uba3Q8C878 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.69■□□□□ 0.26
Uba3Q8C878 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Uba3Q8C878 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Uba3Q8C878 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Uba3Q8C878 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Uba3Q8C878 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Uba3Q8C878 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Uba3Q8C878 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Uba3Q8C878 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Uba3Q8C878 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.69■□□□□ 0.26
Uba3Q8C878 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Uba3Q8C878 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Uba3Q8C878 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Uba3Q8C878 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.69■□□□□ 0.26
Uba3Q8C878 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.69■□□□□ 0.26
Uba3Q8C878 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Uba3Q8C878 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Uba3Q8C878 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Uba3Q8C878 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Uba3Q8C878 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Uba3Q8C878 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.69■□□□□ 0.26
Uba3Q8C878 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Uba3Q8C878 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Uba3Q8C878 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.68■□□□□ 0.26
Uba3Q8C878 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Uba3Q8C878 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Uba3Q8C878 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Uba3Q8C878 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Uba3Q8C878 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Uba3Q8C878 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Uba3Q8C878 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Uba3Q8C878 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Uba3Q8C878 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Uba3Q8C878 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Uba3Q8C878 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.68■□□□□ 0.26
Uba3Q8C878 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.68■□□□□ 0.26
Uba3Q8C878 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Uba3Q8C878 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Uba3Q8C878 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Uba3Q8C878 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Uba3Q8C878 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Uba3Q8C878 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Uba3Q8C878 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Uba3Q8C878 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Uba3Q8C878 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Uba3Q8C878 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Uba3Q8C878 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.67■□□□□ 0.26
Uba3Q8C878 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Uba3Q8C878 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Uba3Q8C878 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Uba3Q8C878 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.67■□□□□ 0.26
Uba3Q8C878 Gm43347-201ENSMUST00000200226 580 ntBASIC16.67■□□□□ 0.26
Uba3Q8C878 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Uba3Q8C878 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Uba3Q8C878 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Uba3Q8C878 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Uba3Q8C878 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.67■□□□□ 0.26
Uba3Q8C878 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Uba3Q8C878 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.67■□□□□ 0.26
Uba3Q8C878 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Uba3Q8C878 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Uba3Q8C878 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Uba3Q8C878 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Uba3Q8C878 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Uba3Q8C878 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Uba3Q8C878 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Uba3Q8C878 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Uba3Q8C878 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Uba3Q8C878 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Uba3Q8C878 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Uba3Q8C878 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms