Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Depdc1bQ8BH88 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Depdc1bQ8BH88 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Depdc1bQ8BH88 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Depdc1bQ8BH88 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Depdc1bQ8BH88 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Depdc1bQ8BH88 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Depdc1bQ8BH88 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Depdc1bQ8BH88 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Depdc1bQ8BH88 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Depdc1bQ8BH88 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Depdc1bQ8BH88 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Depdc1bQ8BH88 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Depdc1bQ8BH88 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Depdc1bQ8BH88 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Depdc1bQ8BH88 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.24■□□□□ 0.35
Depdc1bQ8BH88 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Depdc1bQ8BH88 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Depdc1bQ8BH88 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Depdc1bQ8BH88 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Depdc1bQ8BH88 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Depdc1bQ8BH88 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Depdc1bQ8BH88 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Depdc1bQ8BH88 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Depdc1bQ8BH88 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Depdc1bQ8BH88 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.24■□□□□ 0.35
Depdc1bQ8BH88 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.24■□□□□ 0.35
Depdc1bQ8BH88 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.24■□□□□ 0.35
Depdc1bQ8BH88 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Depdc1bQ8BH88 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.24■□□□□ 0.35
Depdc1bQ8BH88 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Depdc1bQ8BH88 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Depdc1bQ8BH88 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Depdc1bQ8BH88 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Depdc1bQ8BH88 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Depdc1bQ8BH88 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Depdc1bQ8BH88 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Depdc1bQ8BH88 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Depdc1bQ8BH88 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Depdc1bQ8BH88 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Depdc1bQ8BH88 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Depdc1bQ8BH88 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Depdc1bQ8BH88 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Depdc1bQ8BH88 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Depdc1bQ8BH88 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Depdc1bQ8BH88 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Depdc1bQ8BH88 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Depdc1bQ8BH88 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.23■□□□□ 0.35
Depdc1bQ8BH88 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.23■□□□□ 0.35
Depdc1bQ8BH88 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Depdc1bQ8BH88 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Depdc1bQ8BH88 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Depdc1bQ8BH88 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Depdc1bQ8BH88 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Depdc1bQ8BH88 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Depdc1bQ8BH88 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Depdc1bQ8BH88 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Depdc1bQ8BH88 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Depdc1bQ8BH88 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.23■□□□□ 0.35
Depdc1bQ8BH88 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Depdc1bQ8BH88 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Depdc1bQ8BH88 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Depdc1bQ8BH88 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Depdc1bQ8BH88 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Depdc1bQ8BH88 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Depdc1bQ8BH88 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Depdc1bQ8BH88 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Depdc1bQ8BH88 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.22■□□□□ 0.35
Depdc1bQ8BH88 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Depdc1bQ8BH88 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Depdc1bQ8BH88 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Depdc1bQ8BH88 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Depdc1bQ8BH88 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Depdc1bQ8BH88 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Depdc1bQ8BH88 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Depdc1bQ8BH88 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.22■□□□□ 0.35
Depdc1bQ8BH88 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Depdc1bQ8BH88 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Depdc1bQ8BH88 Gm44430-201ENSMUST00000203376 995 ntBASIC17.22■□□□□ 0.35
Depdc1bQ8BH88 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.22■□□□□ 0.35
Depdc1bQ8BH88 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Depdc1bQ8BH88 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Depdc1bQ8BH88 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Depdc1bQ8BH88 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Depdc1bQ8BH88 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Depdc1bQ8BH88 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.22■□□□□ 0.35
Depdc1bQ8BH88 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Depdc1bQ8BH88 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Depdc1bQ8BH88 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Depdc1bQ8BH88 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Depdc1bQ8BH88 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Depdc1bQ8BH88 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Depdc1bQ8BH88 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Depdc1bQ8BH88 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Depdc1bQ8BH88 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Depdc1bQ8BH88 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Depdc1bQ8BH88 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Depdc1bQ8BH88 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Depdc1bQ8BH88 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Depdc1bQ8BH88 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms