Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Krt42Q6IFX2 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Krt42Q6IFX2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Krt42Q6IFX2 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Krt42Q6IFX2 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Krt42Q6IFX2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Krt42Q6IFX2 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Krt42Q6IFX2 Gm10698-201ENSMUST00000182663 604 ntBASIC16.33■□□□□ 0.2
Krt42Q6IFX2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Krt42Q6IFX2 Gm18115-201ENSMUST00000221209 621 ntBASIC16.33■□□□□ 0.2
Krt42Q6IFX2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.33■□□□□ 0.2
Krt42Q6IFX2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Krt42Q6IFX2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Krt42Q6IFX2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.33■□□□□ 0.2
Krt42Q6IFX2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Krt42Q6IFX2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.33■□□□□ 0.2
Krt42Q6IFX2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Krt42Q6IFX2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.33■□□□□ 0.2
Krt42Q6IFX2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.33■□□□□ 0.2
Krt42Q6IFX2 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.33■□□□□ 0.2
Krt42Q6IFX2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Krt42Q6IFX2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Krt42Q6IFX2 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Krt42Q6IFX2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Krt42Q6IFX2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Krt42Q6IFX2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Krt42Q6IFX2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Krt42Q6IFX2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Krt42Q6IFX2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Krt42Q6IFX2 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Krt42Q6IFX2 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Krt42Q6IFX2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Krt42Q6IFX2 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt42Q6IFX2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt42Q6IFX2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt42Q6IFX2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt42Q6IFX2 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt42Q6IFX2 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.32■□□□□ 0.2
Krt42Q6IFX2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Krt42Q6IFX2 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Krt42Q6IFX2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Krt42Q6IFX2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Krt42Q6IFX2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Krt42Q6IFX2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.32■□□□□ 0.2
Krt42Q6IFX2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Krt42Q6IFX2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.32■□□□□ 0.2
Krt42Q6IFX2 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt42Q6IFX2 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.32■□□□□ 0.2
Krt42Q6IFX2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt42Q6IFX2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt42Q6IFX2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt42Q6IFX2 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Krt42Q6IFX2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt42Q6IFX2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Krt42Q6IFX2 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Krt42Q6IFX2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.31■□□□□ 0.2
Krt42Q6IFX2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt42Q6IFX2 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt42Q6IFX2 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt42Q6IFX2 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt42Q6IFX2 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt42Q6IFX2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt42Q6IFX2 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Krt42Q6IFX2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Krt42Q6IFX2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Krt42Q6IFX2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Krt42Q6IFX2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Krt42Q6IFX2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt42Q6IFX2 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Krt42Q6IFX2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Krt42Q6IFX2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.31■□□□□ 0.2
Krt42Q6IFX2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt42Q6IFX2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.31■□□□□ 0.2
Krt42Q6IFX2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Krt42Q6IFX2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt42Q6IFX2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt42Q6IFX2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt42Q6IFX2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Krt42Q6IFX2 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt42Q6IFX2 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.31■□□□□ 0.2
Krt42Q6IFX2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt42Q6IFX2 Efs-202ENSMUST00000227037 2540 ntBASIC16.3■□□□□ 0.2
Krt42Q6IFX2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.3■□□□□ 0.2
Krt42Q6IFX2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Krt42Q6IFX2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Krt42Q6IFX2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Krt42Q6IFX2 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Krt42Q6IFX2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Krt42Q6IFX2 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Krt42Q6IFX2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Krt42Q6IFX2 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Krt42Q6IFX2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Krt42Q6IFX2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Krt42Q6IFX2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Krt42Q6IFX2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.3■□□□□ 0.2
Krt42Q6IFX2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Krt42Q6IFX2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.3■□□□□ 0.2
Krt42Q6IFX2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.3■□□□□ 0.2
Krt42Q6IFX2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.3■□□□□ 0.2
Krt42Q6IFX2 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms