Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxc1Q61572 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxc1Q61572 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxc1Q61572 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxc1Q61572 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxc1Q61572 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Foxc1Q61572 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxc1Q61572 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxc1Q61572 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxc1Q61572 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxc1Q61572 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Foxc1Q61572 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Foxc1Q61572 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxc1Q61572 Gm24589-201ENSMUST00000116692 94 ntBASIC11.66□□□□□ -0.54
Foxc1Q61572 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Foxc1Q61572 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC11.66□□□□□ -0.54
Foxc1Q61572 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Foxc1Q61572 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxc1Q61572 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC11.66□□□□□ -0.54
Foxc1Q61572 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxc1Q61572 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC11.66□□□□□ -0.54
Foxc1Q61572 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxc1Q61572 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxc1Q61572 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Foxc1Q61572 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxc1Q61572 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxc1Q61572 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Foxc1Q61572 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxc1Q61572 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC11.65□□□□□ -0.54
Foxc1Q61572 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Foxc1Q61572 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Foxc1Q61572 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC11.65□□□□□ -0.54
Foxc1Q61572 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Foxc1Q61572 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Foxc1Q61572 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Foxc1Q61572 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Foxc1Q61572 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Foxc1Q61572 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Foxc1Q61572 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Foxc1Q61572 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Foxc1Q61572 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Foxc1Q61572 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Foxc1Q61572 Gm27357-201ENSMUST00000183754 135 ntBASIC11.65□□□□□ -0.54
Foxc1Q61572 Gm44430-201ENSMUST00000203376 995 ntBASIC11.65□□□□□ -0.54
Foxc1Q61572 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.65□□□□□ -0.54
Foxc1Q61572 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Foxc1Q61572 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Foxc1Q61572 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Foxc1Q61572 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Foxc1Q61572 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Foxc1Q61572 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Foxc1Q61572 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Foxc1Q61572 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Foxc1Q61572 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Foxc1Q61572 Zkscan4-202ENSMUST00000225845 1506 ntBASIC11.65□□□□□ -0.55
Foxc1Q61572 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Foxc1Q61572 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Foxc1Q61572 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Foxc1Q61572 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Foxc1Q61572 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Foxc1Q61572 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Foxc1Q61572 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Foxc1Q61572 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Foxc1Q61572 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Foxc1Q61572 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Foxc1Q61572 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Foxc1Q61572 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Foxc1Q61572 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Foxc1Q61572 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Foxc1Q61572 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Foxc1Q61572 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Foxc1Q61572 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Foxc1Q61572 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Foxc1Q61572 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Foxc1Q61572 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Foxc1Q61572 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Foxc1Q61572 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Foxc1Q61572 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Foxc1Q61572 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Foxc1Q61572 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Foxc1Q61572 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Foxc1Q61572 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Foxc1Q61572 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Foxc1Q61572 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Foxc1Q61572 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Foxc1Q61572 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Foxc1Q61572 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC11.64□□□□□ -0.55
Foxc1Q61572 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC11.64□□□□□ -0.55
Foxc1Q61572 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC11.64□□□□□ -0.55
Foxc1Q61572 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Foxc1Q61572 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Foxc1Q61572 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Foxc1Q61572 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Foxc1Q61572 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Foxc1Q61572 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Foxc1Q61572 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Foxc1Q61572 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Foxc1Q61572 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Foxc1Q61572 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Foxc1Q61572 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms