Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ripk1Q60855 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ripk1Q60855 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ripk1Q60855 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.98□□□□□ -0.01
Ripk1Q60855 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ripk1Q60855 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ripk1Q60855 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ripk1Q60855 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ripk1Q60855 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ripk1Q60855 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ripk1Q60855 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ripk1Q60855 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ripk1Q60855 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ripk1Q60855 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.98□□□□□ -0.01
Ripk1Q60855 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ripk1Q60855 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ripk1Q60855 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ripk1Q60855 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ripk1Q60855 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ripk1Q60855 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ripk1Q60855 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ripk1Q60855 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ripk1Q60855 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ripk1Q60855 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ripk1Q60855 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.98□□□□□ -0.01
Ripk1Q60855 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ripk1Q60855 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ripk1Q60855 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ripk1Q60855 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ripk1Q60855 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ripk1Q60855 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ripk1Q60855 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ripk1Q60855 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ripk1Q60855 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.97□□□□□ -0.01
Ripk1Q60855 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ripk1Q60855 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ripk1Q60855 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ripk1Q60855 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ripk1Q60855 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Ripk1Q60855 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ripk1Q60855 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ripk1Q60855 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ripk1Q60855 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ripk1Q60855 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ripk1Q60855 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ripk1Q60855 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ripk1Q60855 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ripk1Q60855 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ripk1Q60855 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ripk1Q60855 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Ripk1Q60855 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ripk1Q60855 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ripk1Q60855 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ripk1Q60855 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
Ripk1Q60855 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.96□□□□□ -0.01
Ripk1Q60855 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ripk1Q60855 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Ripk1Q60855 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ripk1Q60855 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.96□□□□□ -0.01
Ripk1Q60855 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ripk1Q60855 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ripk1Q60855 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Ripk1Q60855 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.96□□□□□ -0.01
Ripk1Q60855 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ripk1Q60855 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.96□□□□□ -0.01
Ripk1Q60855 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ripk1Q60855 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.96□□□□□ -0.01
Ripk1Q60855 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ripk1Q60855 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ripk1Q60855 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ripk1Q60855 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ripk1Q60855 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ripk1Q60855 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ripk1Q60855 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ripk1Q60855 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ripk1Q60855 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ripk1Q60855 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ripk1Q60855 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ripk1Q60855 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ripk1Q60855 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ripk1Q60855 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ripk1Q60855 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ripk1Q60855 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ripk1Q60855 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ripk1Q60855 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ripk1Q60855 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ripk1Q60855 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ripk1Q60855 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ripk1Q60855 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ripk1Q60855 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ripk1Q60855 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.95□□□□□ -0.02
Ripk1Q60855 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ripk1Q60855 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.95□□□□□ -0.02
Ripk1Q60855 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ripk1Q60855 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.95□□□□□ -0.02
Ripk1Q60855 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ripk1Q60855 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ripk1Q60855 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ripk1Q60855 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ripk1Q60855 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms