Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav6d-4Q5R1I0 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Gm7230-201ENSMUST00000173026 815 ntBASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Mir5131-201ENSMUST00000175426 93 ntBASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Gm6089-201ENSMUST00000197666 938 ntBASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Gm2651-201ENSMUST00000203560 838 ntBASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-4Q5R1I0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6d-4Q5R1I0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6d-4Q5R1I0 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6d-4Q5R1I0 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6d-4Q5R1I0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms