Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rc3h1Q4VGL6 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rc3h1Q4VGL6 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rc3h1Q4VGL6 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rc3h1Q4VGL6 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Rc3h1Q4VGL6 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rc3h1Q4VGL6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Rc3h1Q4VGL6 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rc3h1Q4VGL6 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rc3h1Q4VGL6 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rc3h1Q4VGL6 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.28■□□□□ 0.52
Rc3h1Q4VGL6 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rc3h1Q4VGL6 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Rc3h1Q4VGL6 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.28■□□□□ 0.52
Rc3h1Q4VGL6 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.28■□□□□ 0.52
Rc3h1Q4VGL6 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.28■□□□□ 0.52
Rc3h1Q4VGL6 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.28■□□□□ 0.52
Rc3h1Q4VGL6 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.28■□□□□ 0.52
Rc3h1Q4VGL6 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rc3h1Q4VGL6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rc3h1Q4VGL6 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rc3h1Q4VGL6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rc3h1Q4VGL6 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Rc3h1Q4VGL6 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rc3h1Q4VGL6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rc3h1Q4VGL6 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.27■□□□□ 0.52
Rc3h1Q4VGL6 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rc3h1Q4VGL6 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rc3h1Q4VGL6 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rc3h1Q4VGL6 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Rc3h1Q4VGL6 Gm8344-201ENSMUST00000119813 856 ntBASIC18.27■□□□□ 0.52
Rc3h1Q4VGL6 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Rc3h1Q4VGL6 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.27■□□□□ 0.52
Rc3h1Q4VGL6 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rc3h1Q4VGL6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.27■□□□□ 0.52
Rc3h1Q4VGL6 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.27■□□□□ 0.52
Rc3h1Q4VGL6 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rc3h1Q4VGL6 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.27■□□□□ 0.52
Rc3h1Q4VGL6 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rc3h1Q4VGL6 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rc3h1Q4VGL6 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rc3h1Q4VGL6 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rc3h1Q4VGL6 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Rc3h1Q4VGL6 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Rc3h1Q4VGL6 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rc3h1Q4VGL6 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rc3h1Q4VGL6 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rc3h1Q4VGL6 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rc3h1Q4VGL6 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Rc3h1Q4VGL6 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rc3h1Q4VGL6 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rc3h1Q4VGL6 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rc3h1Q4VGL6 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rc3h1Q4VGL6 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.25■□□□□ 0.51
Rc3h1Q4VGL6 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rc3h1Q4VGL6 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rc3h1Q4VGL6 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rc3h1Q4VGL6 Gm15358-201ENSMUST00000119249 520 ntBASIC18.25■□□□□ 0.51
Rc3h1Q4VGL6 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rc3h1Q4VGL6 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.25■□□□□ 0.51
Rc3h1Q4VGL6 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.25■□□□□ 0.51
Rc3h1Q4VGL6 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.25■□□□□ 0.51
Rc3h1Q4VGL6 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rc3h1Q4VGL6 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rc3h1Q4VGL6 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rc3h1Q4VGL6 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.25■□□□□ 0.51
Rc3h1Q4VGL6 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rc3h1Q4VGL6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rc3h1Q4VGL6 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms