Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf149Q3U2C5 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Rnf149Q3U2C5 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf149Q3U2C5 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf149Q3U2C5 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Rnf149Q3U2C5 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.28□□□□□ -0.12
Rnf149Q3U2C5 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf149Q3U2C5 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf149Q3U2C5 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf149Q3U2C5 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
Rnf149Q3U2C5 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Rnf149Q3U2C5 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf149Q3U2C5 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.28□□□□□ -0.12
Rnf149Q3U2C5 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf149Q3U2C5 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf149Q3U2C5 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.27□□□□□ -0.12
Rnf149Q3U2C5 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf149Q3U2C5 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf149Q3U2C5 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Rnf149Q3U2C5 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf149Q3U2C5 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf149Q3U2C5 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf149Q3U2C5 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.27□□□□□ -0.13
Rnf149Q3U2C5 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf149Q3U2C5 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Rnf149Q3U2C5 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf149Q3U2C5 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf149Q3U2C5 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf149Q3U2C5 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.27□□□□□ -0.13
Rnf149Q3U2C5 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf149Q3U2C5 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Rnf149Q3U2C5 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf149Q3U2C5 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Gm10231-201ENSMUST00000181584 441 ntBASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Gm10175-202ENSMUST00000208752 441 ntBASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf149Q3U2C5 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf149Q3U2C5 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms