Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim63Q38HM4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim63Q38HM4 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim63Q38HM4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trim63Q38HM4 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim63Q38HM4 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim63Q38HM4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.15□□□□□ -0.3
Trim63Q38HM4 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim63Q38HM4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim63Q38HM4 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trim63Q38HM4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim63Q38HM4 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim63Q38HM4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trim63Q38HM4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trim63Q38HM4 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim63Q38HM4 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim63Q38HM4 Rubie-203ENSMUST00000227803 2430 ntBASIC13.15□□□□□ -0.3
Trim63Q38HM4 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim63Q38HM4 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim63Q38HM4 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim63Q38HM4 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim63Q38HM4 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim63Q38HM4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim63Q38HM4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim63Q38HM4 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim63Q38HM4 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim63Q38HM4 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim63Q38HM4 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.15□□□□□ -0.3
Trim63Q38HM4 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Trim63Q38HM4 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trim63Q38HM4 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trim63Q38HM4 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.14□□□□□ -0.31
Trim63Q38HM4 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim63Q38HM4 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim63Q38HM4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim63Q38HM4 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim63Q38HM4 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim63Q38HM4 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim63Q38HM4 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.14□□□□□ -0.31
Trim63Q38HM4 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim63Q38HM4 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim63Q38HM4 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim63Q38HM4 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim63Q38HM4 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim63Q38HM4 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim63Q38HM4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim63Q38HM4 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.14□□□□□ -0.31
Trim63Q38HM4 Gm27801-201ENSMUST00000184174 223 ntBASIC13.14□□□□□ -0.31
Trim63Q38HM4 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim63Q38HM4 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim63Q38HM4 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim63Q38HM4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim63Q38HM4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim63Q38HM4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trim63Q38HM4 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim63Q38HM4 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim63Q38HM4 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.14□□□□□ -0.31
Trim63Q38HM4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim63Q38HM4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim63Q38HM4 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.14□□□□□ -0.31
Trim63Q38HM4 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.14□□□□□ -0.31
Trim63Q38HM4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim63Q38HM4 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim63Q38HM4 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim63Q38HM4 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim63Q38HM4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.13□□□□□ -0.31
Trim63Q38HM4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.13□□□□□ -0.31
Trim63Q38HM4 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim63Q38HM4 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.13□□□□□ -0.31
Trim63Q38HM4 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim63Q38HM4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Gm12134-201ENSMUST00000122109 520 ntBASIC13.13□□□□□ -0.31
Trim63Q38HM4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Gm15820-201ENSMUST00000201566 728 ntBASIC13.13□□□□□ -0.31
Trim63Q38HM4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trim63Q38HM4 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms