Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IhhP97812 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
IhhP97812 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.39■□□□□ 0.22
IhhP97812 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IhhP97812 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IhhP97812 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
IhhP97812 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
IhhP97812 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IhhP97812 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IhhP97812 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.39■□□□□ 0.21
IhhP97812 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
IhhP97812 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
IhhP97812 Gm13036-201ENSMUST00000117799 748 ntBASIC16.39■□□□□ 0.21
IhhP97812 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IhhP97812 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.39■□□□□ 0.21
IhhP97812 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IhhP97812 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.39■□□□□ 0.21
IhhP97812 Gm27525-201ENSMUST00000184465 107 ntBASIC16.39■□□□□ 0.21
IhhP97812 Gm27628-201ENSMUST00000184911 107 ntBASIC16.39■□□□□ 0.21
IhhP97812 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IhhP97812 AV026068-213ENSMUST00000223675 1171 ntBASIC16.39■□□□□ 0.21
IhhP97812 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
IhhP97812 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IhhP97812 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IhhP97812 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
IhhP97812 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IhhP97812 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IhhP97812 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IhhP97812 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
IhhP97812 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IhhP97812 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.39■□□□□ 0.21
IhhP97812 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.39■□□□□ 0.21
IhhP97812 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IhhP97812 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IhhP97812 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IhhP97812 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IhhP97812 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IhhP97812 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IhhP97812 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
IhhP97812 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IhhP97812 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
IhhP97812 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IhhP97812 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IhhP97812 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.38■□□□□ 0.21
IhhP97812 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IhhP97812 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
IhhP97812 Gm19164-201ENSMUST00000210667 640 ntBASIC16.38■□□□□ 0.21
IhhP97812 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.38■□□□□ 0.21
IhhP97812 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.38■□□□□ 0.21
IhhP97812 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
IhhP97812 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.38■□□□□ 0.21
IhhP97812 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IhhP97812 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.38■□□□□ 0.21
IhhP97812 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IhhP97812 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
IhhP97812 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IhhP97812 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
IhhP97812 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
IhhP97812 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IhhP97812 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
IhhP97812 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IhhP97812 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
IhhP97812 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IhhP97812 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.37■□□□□ 0.21
IhhP97812 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IhhP97812 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IhhP97812 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
IhhP97812 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.37■□□□□ 0.21
IhhP97812 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.37■□□□□ 0.21
IhhP97812 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
IhhP97812 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.37■□□□□ 0.21
IhhP97812 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
IhhP97812 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IhhP97812 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
IhhP97812 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IhhP97812 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IhhP97812 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
IhhP97812 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IhhP97812 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IhhP97812 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
IhhP97812 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
IhhP97812 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.37■□□□□ 0.21
IhhP97812 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IhhP97812 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.36■□□□□ 0.21
IhhP97812 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
IhhP97812 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IhhP97812 Gm1401-201ENSMUST00000122048 772 ntBASIC16.36■□□□□ 0.21
IhhP97812 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IhhP97812 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
IhhP97812 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.36■□□□□ 0.21
IhhP97812 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
IhhP97812 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IhhP97812 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IhhP97812 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
IhhP97812 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IhhP97812 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IhhP97812 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IhhP97812 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
IhhP97812 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
IhhP97812 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms