Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 AC125311.2-201ENSMUST00000227477 1940 ntBASIC9.41□□□□□ -0.9
Rps28P62858 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Rps28P62858 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Rps28P62858 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Rps28P62858 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC9.41□□□□□ -0.9
Rps28P62858 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Rps28P62858 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Rps28P62858 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Rps28P62858 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rps28P62858 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rps28P62858 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rps28P62858 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rps28P62858 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rps28P62858 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rps28P62858 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rps28P62858 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC9.4□□□□□ -0.9
Rps28P62858 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rps28P62858 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rps28P62858 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rps28P62858 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rps28P62858 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rps28P62858 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rps28P62858 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rps28P62858 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rps28P62858 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rps28P62858 Gm18041-201ENSMUST00000218210 618 ntBASIC9.4□□□□□ -0.9
Rps28P62858 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Rps28P62858 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rps28P62858 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rps28P62858 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rps28P62858 Gm43721-201ENSMUST00000199677 2313 ntBASIC9.4□□□□□ -0.9
Rps28P62858 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rps28P62858 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rps28P62858 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rps28P62858 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rps28P62858 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Rps28P62858 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rps28P62858 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.91
Rps28P62858 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Rps28P62858 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Rps28P62858 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC9.4□□□□□ -0.91
Rps28P62858 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Rps28P62858 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.91
Rps28P62858 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Rps28P62858 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Rps28P62858 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rps28P62858 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rps28P62858 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC9.39□□□□□ -0.91
Rps28P62858 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rps28P62858 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC9.39□□□□□ -0.91
Rps28P62858 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Rps28P62858 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rps28P62858 Gm37644-201ENSMUST00000192190 2270 ntBASIC9.39□□□□□ -0.91
Rps28P62858 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rps28P62858 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rps28P62858 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC9.39□□□□□ -0.91
Rps28P62858 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rps28P62858 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rps28P62858 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rps28P62858 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rps28P62858 AC157572.2-201ENSMUST00000226970 908 ntBASIC9.39□□□□□ -0.91
Rps28P62858 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rps28P62858 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Rps28P62858 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms